| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is tesA [H]
Identifier: 74318167
GI number: 74318167
Start: 2236461
End: 2237072
Strand: Direct
Name: tesA [H]
Synonym: Tbd_2149
Alternate gene names: 74318167
Gene position: 2236461-2237072 (Clockwise)
Preceding gene: 74318166
Following gene: 74318168
Centisome position: 76.86
GC content: 68.95
Gene sequence:
>612_bases ATGTCGGCAGCCCGGCGATCGCTCGCTGCGCTCGTTGCCGTCTTCCTCGTCGTCGGCTGCGAACGGGCACCGACCCTGCC CAAGCTCGGCCCCGACGACGTCATCGTCGCCTTCGGTGACAGCCTCACCTTCGGTACCGGCGCGAGCCGTGAAACCGCCT ACCCCGCAGTGCTCGCCACGCTCACCGGCCGTACCGTCGTCAATGCCGGCGTTCCGGGCGACACGACGGCATCTGCCCTG CAACGCCTGCCCGCGGTGCTCGATCAACACCGGCCTCGTCTCGTTCTGCTCTGCCTCGGCGGCAACGACATGCTTCGAAA ACAGCCCGAAGCCGACACCGAAAACAACCTGCGCCGCCTTGTCGCGTCGATCCGTGCGAGCGGCGCCGAGGTGATGCTGA TCGCGGTCCCGGCGCCCACACTCTTCGGCCGACCGCCCGCGTTCTATGCGCGCGTCGCGGACGACCTGAAGCTGCCGCTC GAGGACGACGCCTTCGACGCCGTGCTCCGCGACAACCGCCTGAAGGCCGACCCGATTCACGCCAACGCCGCCGGCTATCG CGTCGTCGCCGAGCAGCTGGCCGATTTTCTCGACGACGCCGGCGCGCTATGA
Upstream 100 bases:
>100_bases GTTCAAGGGCATCGTCGCGATCGGACGCGACGTCGAGCGCCGCGGCTCCAAGCAGGTGGGGTCGATCCTCATCGACCGCA TGACGGTGGCCGGCAACTGA
Downstream 100 bases:
>100_bases AAACGCTGCTTGCGCTGGCCGGCCGGATCGACGCACTGACCGAACGCGTCGGGCGCATCGTGATCTGGCTGGTTCTCGTG GCCACGCTCATTTCCGCCGG
Product: putative lipase
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSAARRSLAALVAVFLVVGCERAPTLPKLGPDDVIVAFGDSLTFGTGASRETAYPAVLATLTGRTVVNAGVPGDTTASAL QRLPAVLDQHRPRLVLLCLGGNDMLRKQPEADTENNLRRLVASIRASGAEVMLIAVPAPTLFGRPPAFYARVADDLKLPL EDDAFDAVLRDNRLKADPIHANAAGYRVVAEQLADFLDDAGAL
Sequences:
>Translated_203_residues MSAARRSLAALVAVFLVVGCERAPTLPKLGPDDVIVAFGDSLTFGTGASRETAYPAVLATLTGRTVVNAGVPGDTTASAL QRLPAVLDQHRPRLVLLCLGGNDMLRKQPEADTENNLRRLVASIRASGAEVMLIAVPAPTLFGRPPAFYARVADDLKLPL EDDAFDAVLRDNRLKADPIHANAAGYRVVAEQLADFLDDAGAL >Mature_202_residues SAARRSLAALVAVFLVVGCERAPTLPKLGPDDVIVAFGDSLTFGTGASRETAYPAVLATLTGRTVVNAGVPGDTTASALQ RLPAVLDQHRPRLVLLCLGGNDMLRKQPEADTENNLRRLVASIRASGAEVMLIAVPAPTLFGRPPAFYARVADDLKLPLE DDAFDAVLRDNRLKADPIHANAAGYRVVAEQLADFLDDAGAL
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=174, Percent_Identity=35.632183908046, Blast_Score=100, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 21439; Mature: 21308
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAARRSLAALVAVFLVVGCERAPTLPKLGPDDVIVAFGDSLTFGTGASRETAYPAVLAT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCHHHHHHHH LTGRTVVNAGVPGDTTASALQRLPAVLDQHRPRLVLLCLGGNDMLRKQPEADTENNLRRL HCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHH VASIRASGAEVMLIAVPAPTLFGRPPAFYARVADDLKLPLEDDAFDAVLRDNRLKADPIH HHHHHCCCCEEEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC ANAAGYRVVAEQLADFLDDAGAL CCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAARRSLAALVAVFLVVGCERAPTLPKLGPDDVIVAFGDSLTFGTGASRETAYPAVLAT CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCHHHHHHHH LTGRTVVNAGVPGDTTASALQRLPAVLDQHRPRLVLLCLGGNDMLRKQPEADTENNLRRL HCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHH VASIRASGAEVMLIAVPAPTLFGRPPAFYARVADDLKLPLEDDAFDAVLRDNRLKADPIH HHHHHCCCCEEEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC ANAAGYRVVAEQLADFLDDAGAL CCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]