| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318162
Identifier: 74318162
GI number: 74318162
Start: 2229403
End: 2230125
Strand: Direct
Name: 74318162
Synonym: Tbd_2144
Alternate gene names: NA
Gene position: 2229403-2230125 (Clockwise)
Preceding gene: 74318161
Following gene: 74318166
Centisome position: 76.62
GC content: 67.63
Gene sequence:
>723_bases ATGAGCACGGTTATTGCGGCGGCCGCGGGCGCGTTGCGCGATCTGTTCAGCCTGCGTGTGCTCTGGATCATCGTCTGGCC GATCCTGGTCGCGACCCTGCTATGGCTCGGGCTCGGCGTGGCGTTCTGGGAAACCTTCTCGGGCTGGATCGCCGAGGCTC TCGTGTGGAGTGGGATCGATACCTGGTTGACCGAGCTGCAGCCGCAGTGGATCGCGCACGGACTCCAGGTCATCGCCTAC CTGCTCGTCTTCATTCCGCTGGTCTTGCTCACGGCGCTCGTCATCACCGCGATCTTCGCGATGCCGGCACTCGTCGCGCT CGTCGCGGAACGGCATTTTCCCGAACTCGCCCGCGAACGCGGCGGCGGCTTCGTCGGCAGCCTGTGGAACGCGCTCGTCG CGCTGCTGCTGTTCGCCGGCCTATGGGTCGCGAGCTTGCCGCTGTGGCTGGTCGGCGTCGGCGTGATCGTGCCTTTCATC GCCGCGGCCTATCTGAACCAGCGGCTGTTCCGTTACGACGCGGTCGCCGACCACGCGAGCCGCGACGAGATGGCGCTGCT GTTCCGGCGCGAGCGTGCCGGCTGGTGGGGGCTCGGTCTGCTAACCGGGCTGTTCCAGTTCGTGCCGGTGCTCAATCTGC TCGCGCCGGTATTCGCCGCGCTCGCCTTCATCCATTTCGGCCTCGCGCGCATCCGCGCGCTGCGCGCGTCAGGGCCCGGT TGA
Upstream 100 bases:
>100_bases CAGTCCCCTATTGCGTCGACCTCATAGGCGGCCCCTATCTCGAAGCTCGGCCCGGCACGGTCGCGGTGTTCCGCCCGAAG TCGGCGCTGCGGCCGCCAGC
Downstream 100 bases:
>100_bases ATAGCGCCGCCTGAATGCCGCATCAAGATTGATTTCGTGCGCGGTCAGCGCGCCGATCACGCATTGTTCGAGGCTCTCCG GCATGACTACCCGGCCCGAC
Product: transmembrane protein
Products: NA
Alternate protein names: Inner Membrane Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSTVIAAAAGALRDLFSLRVLWIIVWPILVATLLWLGLGVAFWETFSGWIAEALVWSGIDTWLTELQPQWIAHGLQVIAY LLVFIPLVLLTALVITAIFAMPALVALVAERHFPELARERGGGFVGSLWNALVALLLFAGLWVASLPLWLVGVGVIVPFI AAAYLNQRLFRYDAVADHASRDEMALLFRRERAGWWGLGLLTGLFQFVPVLNLLAPVFAALAFIHFGLARIRALRASGPG
Sequences:
>Translated_240_residues MSTVIAAAAGALRDLFSLRVLWIIVWPILVATLLWLGLGVAFWETFSGWIAEALVWSGIDTWLTELQPQWIAHGLQVIAY LLVFIPLVLLTALVITAIFAMPALVALVAERHFPELARERGGGFVGSLWNALVALLLFAGLWVASLPLWLVGVGVIVPFI AAAYLNQRLFRYDAVADHASRDEMALLFRRERAGWWGLGLLTGLFQFVPVLNLLAPVFAALAFIHFGLARIRALRASGPG >Mature_239_residues STVIAAAAGALRDLFSLRVLWIIVWPILVATLLWLGLGVAFWETFSGWIAEALVWSGIDTWLTELQPQWIAHGLQVIAYL LVFIPLVLLTALVITAIFAMPALVALVAERHFPELARERGGGFVGSLWNALVALLLFAGLWVASLPLWLVGVGVIVPFIA AAYLNQRLFRYDAVADHASRDEMALLFRRERAGWWGLGLLTGLFQFVPVLNLLAPVFAALAFIHFGLARIRALRASGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26321; Mature: 26190
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIAAAAGALRDLFSLRVLWIIVWPILVATLLWLGLGVAFWETFSGWIAEALVWSGID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWLTELQPQWIAHGLQVIAYLLVFIPLVLLTALVITAIFAMPALVALVAERHFPELARER HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGGFVGSLWNALVALLLFAGLWVASLPLWLVGVGVIVPFIAAAYLNQRLFRYDAVADHAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDEMALLFRRERAGWWGLGLLTGLFQFVPVLNLLAPVFAALAFIHFGLARIRALRASGPG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STVIAAAAGALRDLFSLRVLWIIVWPILVATLLWLGLGVAFWETFSGWIAEALVWSGID CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWLTELQPQWIAHGLQVIAYLLVFIPLVLLTALVITAIFAMPALVALVAERHFPELARER HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGGFVGSLWNALVALLLFAGLWVASLPLWLVGVGVIVPFIAAAYLNQRLFRYDAVADHAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDEMALLFRRERAGWWGLGLLTGLFQFVPVLNLLAPVFAALAFIHFGLARIRALRASGPG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA