| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318159
Identifier: 74318159
GI number: 74318159
Start: 2227079
End: 2228290
Strand: Reverse
Name: 74318159
Synonym: Tbd_2141
Alternate gene names: NA
Gene position: 2228290-2227079 (Counterclockwise)
Preceding gene: 74318160
Following gene: 74318151
Centisome position: 76.58
GC content: 70.96
Gene sequence:
>1212_bases GTGAGGGCGGCCGCGGCATGGCTTCTTGCGCTGCTCGCGTTCCCCGTGCAGGCGGAGTGGGAATGGAGTGAGCCCGTCAC GCTCGGCACGGCCCGCGGAGCTGCCTCCTTCCCCCATCTCGAGTCGGCGAACCGCCGCGGCGTCGCGGTGTCGGGCGACA GCGTCGGCGTCGCGTGGGAAGACAGCCGCGACGGCACGCCGCACTGTTACCTCGCGCTGAAGCCGCTGGCCGCCCCGGCC TTCGACGCGGAAACGCGTCTCAGCGCCGCGGAATGCTACACGCCGGTGCTGATCGCCGTGAACGGCGGCCGTTTCGTCGC GGCTTGGGAAGAGGGAGGGCGCGTCTACGCACGCGTGCTGCCCGACGGCGAACGGATCGCGCTCAGCACGAGCGACGCGG GACAGGTCACGCTCGCGTCACGCGCCGACCATGTCTATGCAGCGTGGGCCGAACAGGCGGGTCGCTTCCGCCGTATCGTC GTGGCGCGGCTCGAGGTGAAGGAGAACACCGTCACCGTGAACACGGCGAAGCCAGTCGAGGCGAGACCGCCGGCGAACGA ACAGGGCTGGCCGGCGCTGGCCGTGCGCGACGGCGGCGGCGTCACGGTCGCTTGGGAAGACCGGCGCTATCGTCACACTG TGCCGATGGTGAGCCATAGCCGCGACGGACGCAGCTTCGCCACCCCGGTCCGGCTCACCGACCACAAGAGCGGCGCGGTC AACGGCCTCGGCGCCGGCACCGGCGCGATGCGGCCGACGCTCACGGTCTGGAAGCGCAACCGCGTCGCCGCGGTGTGGCT CGACAAGCGCGACTTCCTTTCCGGATACGACGTCTACGCCGCTTTCGATTCCGGCAAACGCCGCTTCGGCCGCAACGTCC AGGTGCAGGACGGTTTCGGCGACAACATGGCGCAATGGCACGCGCAGGCCGTCGGCGACGACGACGGGCGCCTGCTCGTG CTATGGGACGACGCACGCGACGGCACGCCCGACGTCTGGCTCGCGGAATGGAACGGCAAGTCCTTCGGCGACAACGTCGC GGTGCCAGGGGCGTCGGGTCCCGGGGCGCAGACCGACCCGGTCGCGACGCTCGACGCGCAGGGGCGCCTGCACGTGGTGT GGCTCGAGCAGGACGAGGCCAAGGGTGCACGTATCCGCTATGCCAGGGGGACGCCACGCCATCTTGAGTCGAGCCGCGCC GTTGGACGGTAG
Upstream 100 bases:
>100_bases CCGGCTTCAAGACCGTGCAGGACTTCCGCGACTACGACCGCTACGTGCGCGGCGGTCATTACAAGGACCAGACGCTGATG GAATTCCTCGGCGCCAAGTC
Downstream 100 bases:
>100_bases ATCCGGCGTCGGCGCCGATCCTATATCCAGCCGCGGCGCTTGAGCCGCCGATACAGCACGACTGCCGCAGCCCCCGTGCC GAGGAGCAGGGCCGGGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRAAAAWLLALLAFPVQAEWEWSEPVTLGTARGAASFPHLESANRRGVAVSGDSVGVAWEDSRDGTPHCYLALKPLAAPA FDAETRLSAAECYTPVLIAVNGGRFVAAWEEGGRVYARVLPDGERIALSTSDAGQVTLASRADHVYAAWAEQAGRFRRIV VARLEVKENTVTVNTAKPVEARPPANEQGWPALAVRDGGGVTVAWEDRRYRHTVPMVSHSRDGRSFATPVRLTDHKSGAV NGLGAGTGAMRPTLTVWKRNRVAAVWLDKRDFLSGYDVYAAFDSGKRRFGRNVQVQDGFGDNMAQWHAQAVGDDDGRLLV LWDDARDGTPDVWLAEWNGKSFGDNVAVPGASGPGAQTDPVATLDAQGRLHVVWLEQDEAKGARIRYARGTPRHLESSRA VGR
Sequences:
>Translated_403_residues MRAAAAWLLALLAFPVQAEWEWSEPVTLGTARGAASFPHLESANRRGVAVSGDSVGVAWEDSRDGTPHCYLALKPLAAPA FDAETRLSAAECYTPVLIAVNGGRFVAAWEEGGRVYARVLPDGERIALSTSDAGQVTLASRADHVYAAWAEQAGRFRRIV VARLEVKENTVTVNTAKPVEARPPANEQGWPALAVRDGGGVTVAWEDRRYRHTVPMVSHSRDGRSFATPVRLTDHKSGAV NGLGAGTGAMRPTLTVWKRNRVAAVWLDKRDFLSGYDVYAAFDSGKRRFGRNVQVQDGFGDNMAQWHAQAVGDDDGRLLV LWDDARDGTPDVWLAEWNGKSFGDNVAVPGASGPGAQTDPVATLDAQGRLHVVWLEQDEAKGARIRYARGTPRHLESSRA VGR >Mature_403_residues MRAAAAWLLALLAFPVQAEWEWSEPVTLGTARGAASFPHLESANRRGVAVSGDSVGVAWEDSRDGTPHCYLALKPLAAPA FDAETRLSAAECYTPVLIAVNGGRFVAAWEEGGRVYARVLPDGERIALSTSDAGQVTLASRADHVYAAWAEQAGRFRRIV VARLEVKENTVTVNTAKPVEARPPANEQGWPALAVRDGGGVTVAWEDRRYRHTVPMVSHSRDGRSFATPVRLTDHKSGAV NGLGAGTGAMRPTLTVWKRNRVAAVWLDKRDFLSGYDVYAAFDSGKRRFGRNVQVQDGFGDNMAQWHAQAVGDDDGRLLV LWDDARDGTPDVWLAEWNGKSFGDNVAVPGASGPGAQTDPVATLDAQGRLHVVWLEQDEAKGARIRYARGTPRHLESSRA VGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43639; Mature: 43639
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAAAWLLALLAFPVQAEWEWSEPVTLGTARGAASFPHLESANRRGVAVSGDSVGVAWE CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEE DSRDGTPHCYLALKPLAAPAFDAETRLSAAECYTPVLIAVNGGRFVAAWEEGGRVYARVL CCCCCCCEEEEEEECCCCCCCCCHHCCCHHHCCCEEEEEEECCEEEEEEECCCEEEEEEC PDGERIALSTSDAGQVTLASRADHVYAAWAEQAGRFRRIVVARLEVKENTVTVNTAKPVE CCCCEEEEECCCCCEEEEECCCCEEEEHHHHHCCCEEEEEEEEEEECCCEEEEECCCCCC ARPPANEQGWPALAVRDGGGVTVAWEDRRYRHTVPMVSHSRDGRSFATPVRLTDHKSGAV CCCCCCCCCCCEEEEECCCCEEEEECCCCEEEECCEEECCCCCCCEECCEEEECCCCCCC NGLGAGTGAMRPTLTVWKRNRVAAVWLDKRDFLSGYDVYAAFDSGKRRFGRNVQVQDGFG CCCCCCCCCCCCEEEEEECCCEEEEEECCHHHCCCCEEEEEECCCHHHHCCCEEEECCCC DNMAQWHAQAVGDDDGRLLVLWDDARDGTPDVWLAEWNGKSFGDNVAVPGASGPGAQTDP CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC VATLDAQGRLHVVWLEQDEAKGARIRYARGTPRHLESSRAVGR EEEEECCCCEEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCC >Mature Secondary Structure MRAAAAWLLALLAFPVQAEWEWSEPVTLGTARGAASFPHLESANRRGVAVSGDSVGVAWE CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEE DSRDGTPHCYLALKPLAAPAFDAETRLSAAECYTPVLIAVNGGRFVAAWEEGGRVYARVL CCCCCCCEEEEEEECCCCCCCCCHHCCCHHHCCCEEEEEEECCEEEEEEECCCEEEEEEC PDGERIALSTSDAGQVTLASRADHVYAAWAEQAGRFRRIVVARLEVKENTVTVNTAKPVE CCCCEEEEECCCCCEEEEECCCCEEEEHHHHHCCCEEEEEEEEEEECCCEEEEECCCCCC ARPPANEQGWPALAVRDGGGVTVAWEDRRYRHTVPMVSHSRDGRSFATPVRLTDHKSGAV CCCCCCCCCCCEEEEECCCCEEEEECCCCEEEECCEEECCCCCCCEECCEEEECCCCCCC NGLGAGTGAMRPTLTVWKRNRVAAVWLDKRDFLSGYDVYAAFDSGKRRFGRNVQVQDGFG CCCCCCCCCCCCEEEEEECCCEEEEEECCHHHCCCCEEEEEECCCHHHHCCCEEEECCCC DNMAQWHAQAVGDDDGRLLVLWDDARDGTPDVWLAEWNGKSFGDNVAVPGASGPGAQTDP CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC VATLDAQGRLHVVWLEQDEAKGARIRYARGTPRHLESSRAVGR EEEEECCCCEEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA