| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318131
Identifier: 74318131
GI number: 74318131
Start: 2202311
End: 2202943
Strand: Direct
Name: 74318131
Synonym: Tbd_2113
Alternate gene names: NA
Gene position: 2202311-2202943 (Clockwise)
Preceding gene: 74318130
Following gene: 74318132
Centisome position: 75.69
GC content: 69.04
Gene sequence:
>633_bases ATGCGGAAAACGACGCGGGGCCTGCTGATCGCGGCCATGCTGCTGGCCTCGGCGGCCCACGCCGGCGGCCAGCGCGAGGA GGCGTTGGCGGCCAACGTCCGCGCCTCGTTGCAGCGCGCCCTGGCCGACACGGCGGTGACGCGGACGGCGTTTCGCGAGC GCGCCGACGAACACGCCTGGCTCGAGGAAATGTCGCGGCGCCTGGCCAAGCGCATCCCGAACGAGGCCGAACGGCTCGAA TTCCTCACCACCCTGCACTGGGAAGCCTCGCGCGCCGGCGTCGACCCGCAGCTCATGCTCGGCCTGATCCAGGTGGAAAG CGGCTTCCGCAAGTACGCGGTATCGCCGGTTGGCGCCCGCGGCTACACCCAGGTGATGCCGTTCTGGCTCGAGGCGATCG GCAGCCCCGATCACAACCTGTTCCAGCTGCGCACCAACCTGCGCTACGGCGCGCTGATTCTGCGTCACTATATCGATATC GAACGCGGCGACCTCTTTCGCGCCCTCGGCCGTTACAACGGCAGTCTCGGCCGACCGGAATATCCGAATCTCGTCGTCGG CGCGTGGAAGCGCCACTGGGACTACACGCCCCCCACCCGCTCGGCGAGCGCCTCCGCAGACGTGCGAAGCTGA
Upstream 100 bases:
>100_bases TATCAGCCGCGCCGCGCCGCGCCGGAACAGGGCGCCGATGCGCGGAAAATCGCGGTCGCCGAAGCAAAGGCGTTCTTGAT GGGTGTATTGGGAGACTGAC
Downstream 100 bases:
>100_bases CCGTCGCCCCGCTTGATTTCGCGCGCGCGTCAGGGCATCGTAATCGGGCGCGTCAAGCCGGCGCGTGCAACGGGGAGTCG CTCATGAAAACCATCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase SLT Domain Protein; Transglycosylase; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Soluble Lytic Murein Transglycosylase- Related Protein; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAWLEEMSRRLAKRIPNEAERLE FLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGARGYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDI ERGDLFRALGRYNGSLGRPEYPNLVVGAWKRHWDYTPPTRSASASADVRS
Sequences:
>Translated_210_residues MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAWLEEMSRRLAKRIPNEAERLE FLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGARGYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDI ERGDLFRALGRYNGSLGRPEYPNLVVGAWKRHWDYTPPTRSASASADVRS >Mature_210_residues MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAWLEEMSRRLAKRIPNEAERLE FLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGARGYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDI ERGDLFRALGRYNGSLGRPEYPNLVVGAWKRHWDYTPPTRSASASADVRS
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23613; Mature: 23613
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAW CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEMSRRLAKRIPNEAERLEFLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGAR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDIERGDLFRALGRYNGSLGRPE CHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC YPNLVVGAWKRHWDYTPPTRSASASADVRS CCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAW CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEMSRRLAKRIPNEAERLEFLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGAR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDIERGDLFRALGRYNGSLGRPE CHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC YPNLVVGAWKRHWDYTPPTRSASASADVRS CCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA