Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318131

Identifier: 74318131

GI number: 74318131

Start: 2202311

End: 2202943

Strand: Direct

Name: 74318131

Synonym: Tbd_2113

Alternate gene names: NA

Gene position: 2202311-2202943 (Clockwise)

Preceding gene: 74318130

Following gene: 74318132

Centisome position: 75.69

GC content: 69.04

Gene sequence:

>633_bases
ATGCGGAAAACGACGCGGGGCCTGCTGATCGCGGCCATGCTGCTGGCCTCGGCGGCCCACGCCGGCGGCCAGCGCGAGGA
GGCGTTGGCGGCCAACGTCCGCGCCTCGTTGCAGCGCGCCCTGGCCGACACGGCGGTGACGCGGACGGCGTTTCGCGAGC
GCGCCGACGAACACGCCTGGCTCGAGGAAATGTCGCGGCGCCTGGCCAAGCGCATCCCGAACGAGGCCGAACGGCTCGAA
TTCCTCACCACCCTGCACTGGGAAGCCTCGCGCGCCGGCGTCGACCCGCAGCTCATGCTCGGCCTGATCCAGGTGGAAAG
CGGCTTCCGCAAGTACGCGGTATCGCCGGTTGGCGCCCGCGGCTACACCCAGGTGATGCCGTTCTGGCTCGAGGCGATCG
GCAGCCCCGATCACAACCTGTTCCAGCTGCGCACCAACCTGCGCTACGGCGCGCTGATTCTGCGTCACTATATCGATATC
GAACGCGGCGACCTCTTTCGCGCCCTCGGCCGTTACAACGGCAGTCTCGGCCGACCGGAATATCCGAATCTCGTCGTCGG
CGCGTGGAAGCGCCACTGGGACTACACGCCCCCCACCCGCTCGGCGAGCGCCTCCGCAGACGTGCGAAGCTGA

Upstream 100 bases:

>100_bases
TATCAGCCGCGCCGCGCCGCGCCGGAACAGGGCGCCGATGCGCGGAAAATCGCGGTCGCCGAAGCAAAGGCGTTCTTGAT
GGGTGTATTGGGAGACTGAC

Downstream 100 bases:

>100_bases
CCGTCGCCCCGCTTGATTTCGCGCGCGCGTCAGGGCATCGTAATCGGGCGCGTCAAGCCGGCGCGTGCAACGGGGAGTCG
CTCATGAAAACCATCTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transglycosylase SLT Domain Protein; Transglycosylase; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Soluble Lytic Murein Transglycosylase- Related Protein; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAWLEEMSRRLAKRIPNEAERLE
FLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGARGYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDI
ERGDLFRALGRYNGSLGRPEYPNLVVGAWKRHWDYTPPTRSASASADVRS

Sequences:

>Translated_210_residues
MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAWLEEMSRRLAKRIPNEAERLE
FLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGARGYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDI
ERGDLFRALGRYNGSLGRPEYPNLVVGAWKRHWDYTPPTRSASASADVRS
>Mature_210_residues
MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAWLEEMSRRLAKRIPNEAERLE
FLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGARGYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDI
ERGDLFRALGRYNGSLGRPEYPNLVVGAWKRHWDYTPPTRSASASADVRS

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23613; Mature: 23613

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAW
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEMSRRLAKRIPNEAERLEFLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGAR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDIERGDLFRALGRYNGSLGRPE
CHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
YPNLVVGAWKRHWDYTPPTRSASASADVRS
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKTTRGLLIAAMLLASAAHAGGQREEALAANVRASLQRALADTAVTRTAFRERADEHAW
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEMSRRLAKRIPNEAERLEFLTTLHWEASRAGVDPQLMLGLIQVESGFRKYAVSPVGAR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GYTQVMPFWLEAIGSPDHNLFQLRTNLRYGALILRHYIDIERGDLFRALGRYNGSLGRPE
CHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
YPNLVVGAWKRHWDYTPPTRSASASADVRS
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA