| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mrp [H]
Identifier: 74318126
GI number: 74318126
Start: 2197349
End: 2198437
Strand: Reverse
Name: mrp [H]
Synonym: Tbd_2108
Alternate gene names: 74318126
Gene position: 2198437-2197349 (Counterclockwise)
Preceding gene: 74318127
Following gene: 74318125
Centisome position: 75.55
GC content: 62.72
Gene sequence:
>1089_bases ATGGCCGTTTCCGAACTTCAGGTGCAGTCCGCACTGAAAGAGTTGATCGATCCGAATACGCACAAGGACTATGTCACGAC CAAATCCGCCCGCAACATCAAGATCGACGGCGACGCGGTGTCCGTCGACATCGCGCTTGGGTATCCTGCACAAAGCCAGC TCGCCACGATCAAGCAGCAGGTCGAGGACAAGCTCAAGACCCTCGACGGCGTGAGCAAGGCGACGGCCAACGTCAGCTTC AAGATCGTCTCCCACAGCGTCCAGCGCGGCGTCAAGCTGATCCCCAACGTCAAGAACATCATCGCGGTCGCGTCCGGCAA GGGCGGGGTCGGCAAATCGACGACGGCCGTGAACCTCGCGCTCGCGCTTGCGGCCGAGGGCGCCCGCGTCGGCATGCTCG ACGCCGACATCTACGGTCCCTCGCAACCGACGATGCTCGGCATCACCGACAAACCCGAGTCGACCGATGGCAAGAATCTT GATCCCTTGATCGGCCACGGCATCCAGGCCATGTCGATTGGCTTCCTGATCGACGTCGAAACGCCGATGGTGTGGCGCGG GCCGATGGTGACGCAGGCGCTCGAGCAGCTGCTCAACAACACCAACTGGAACGAGCTCGACTACCTCGTCGTCGACCTGC CGCCGGGCACGGGCGACATCCAGTTGACGCTCGCGCAGCGCGTGCCCGTGACCGGCGCCGTGATCGTGACGACGCCGCAG GACATCGCGCTGATCGACGCGCGCAAGGGGCTCAAGATGTTCGAGAAGGTCGGCATCCCGATCATCGGCGTCGTCGAGAA CATGAGCCTGCACATCTGCTCGAACTGCGGGCACGAAGAGCGCATCTTCGGCGAAGGCGGCGGCGAACGCATGTGCCGCG ACTACAACGTCGAGTTTCTCGGCGCGCTGCCGCTTGATTCCAGCATCCGTGCCGACACCGATTCCGGCAAGCCGTCAGTC GTGTCCGACCCGGACGGGCGCGTGACCGAAATCTACAAGCAGATCGCGCGCCGCGTTGCTGTTAAGATTGGCGAGACGGC CGTCGACCATTCGGCCAAATTCCCCAATATCGTCATTTCCAACACCTGA
Upstream 100 bases:
>100_bases GCCAATGACAGGGAATCCCGCGTCCCTTCAGGGTTTTCGTTCACCCAAGGCGCGGGATTTCGTTAAAATGAGCGATTGCT AATCAACCGCTGGAGCAAAC
Downstream 100 bases:
>100_bases TGAGCATCAAGTCCGACCGATGGATCCGCCGCATGGCGGCCGAGCATGGCATGATCGAACCGTTCGAAGCCGGACAGATC AAGCAGGCAGCGGGGCGATC
Product: chromosome partitioning ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MAVSELQVQSALKELIDPNTHKDYVTTKSARNIKIDGDAVSVDIALGYPAQSQLATIKQQVEDKLKTLDGVSKATANVSF KIVSHSVQRGVKLIPNVKNIIAVASGKGGVGKSTTAVNLALALAAEGARVGMLDADIYGPSQPTMLGITDKPESTDGKNL DPLIGHGIQAMSIGFLIDVETPMVWRGPMVTQALEQLLNNTNWNELDYLVVDLPPGTGDIQLTLAQRVPVTGAVIVTTPQ DIALIDARKGLKMFEKVGIPIIGVVENMSLHICSNCGHEERIFGEGGGERMCRDYNVEFLGALPLDSSIRADTDSGKPSV VSDPDGRVTEIYKQIARRVAVKIGETAVDHSAKFPNIVISNT
Sequences:
>Translated_362_residues MAVSELQVQSALKELIDPNTHKDYVTTKSARNIKIDGDAVSVDIALGYPAQSQLATIKQQVEDKLKTLDGVSKATANVSF KIVSHSVQRGVKLIPNVKNIIAVASGKGGVGKSTTAVNLALALAAEGARVGMLDADIYGPSQPTMLGITDKPESTDGKNL DPLIGHGIQAMSIGFLIDVETPMVWRGPMVTQALEQLLNNTNWNELDYLVVDLPPGTGDIQLTLAQRVPVTGAVIVTTPQ DIALIDARKGLKMFEKVGIPIIGVVENMSLHICSNCGHEERIFGEGGGERMCRDYNVEFLGALPLDSSIRADTDSGKPSV VSDPDGRVTEIYKQIARRVAVKIGETAVDHSAKFPNIVISNT >Mature_361_residues AVSELQVQSALKELIDPNTHKDYVTTKSARNIKIDGDAVSVDIALGYPAQSQLATIKQQVEDKLKTLDGVSKATANVSFK IVSHSVQRGVKLIPNVKNIIAVASGKGGVGKSTTAVNLALALAAEGARVGMLDADIYGPSQPTMLGITDKPESTDGKNLD PLIGHGIQAMSIGFLIDVETPMVWRGPMVTQALEQLLNNTNWNELDYLVVDLPPGTGDIQLTLAQRVPVTGAVIVTTPQD IALIDARKGLKMFEKVGIPIIGVVENMSLHICSNCGHEERIFGEGGGERMCRDYNVEFLGALPLDSSIRADTDSGKPSVV SDPDGRVTEIYKQIARRVAVKIGETAVDHSAKFPNIVISNT
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=254, Percent_Identity=50.3937007874016, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI118572611, Length=272, Percent_Identity=40.8088235294118, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI6912540, Length=251, Percent_Identity=38.6454183266932, Blast_Score=172, Evalue=4e-43, Organism=Escherichia coli, GI87082045, Length=337, Percent_Identity=51.3353115727003, Blast_Score=343, Evalue=1e-95, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=39.84375, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321347, Length=292, Percent_Identity=35.2739726027397, Blast_Score=175, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322188, Length=274, Percent_Identity=33.9416058394161, Blast_Score=173, Evalue=4e-44, Organism=Drosophila melanogaster, GI221511043, Length=255, Percent_Identity=42.3529411764706, Blast_Score=221, Evalue=5e-58, Organism=Drosophila melanogaster, GI24667611, Length=256, Percent_Identity=40.625, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI19921440, Length=239, Percent_Identity=39.3305439330544, Blast_Score=151, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38629; Mature: 38498
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSELQVQSALKELIDPNTHKDYVTTKSARNIKIDGDAVSVDIALGYPAQSQLATIKQQ CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEEEEECCCCHHHHHHHHHH VEDKLKTLDGVSKATANVSFKIVSHSVQRGVKLIPNVKNIIAVASGKGGVGKSTTAVNLA HHHHHHHHHCHHHHHCCEEEEEEHHHHHCCHHHCCCCCCEEEEECCCCCCCCCCHHEEEE LALAAEGARVGMLDADIYGPSQPTMLGITDKPESTDGKNLDPLIGHGIQAMSIGFLIDVE EEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC TPMVWRGPMVTQALEQLLNNTNWNELDYLVVDLPPGTGDIQLTLAQRVPVTGAVIVTTPQ CCCEECCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCC DIALIDARKGLKMFEKVGIPIIGVVENMSLHICSNCGHEERIFGEGGGERMCRDYNVEFL CEEEEECHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCHHHCCCEEEE GALPLDSSIRADTDSGKPSVVSDPDGRVTEIYKQIARRVAVKIGETAVDHSAKFPNIVIS EECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEE NT CC >Mature Secondary Structure AVSELQVQSALKELIDPNTHKDYVTTKSARNIKIDGDAVSVDIALGYPAQSQLATIKQQ CHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCEEEEEEEECCCCHHHHHHHHHH VEDKLKTLDGVSKATANVSFKIVSHSVQRGVKLIPNVKNIIAVASGKGGVGKSTTAVNLA HHHHHHHHHCHHHHHCCEEEEEEHHHHHCCHHHCCCCCCEEEEECCCCCCCCCCHHEEEE LALAAEGARVGMLDADIYGPSQPTMLGITDKPESTDGKNLDPLIGHGIQAMSIGFLIDVE EEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCEEEEEEEEEECC TPMVWRGPMVTQALEQLLNNTNWNELDYLVVDLPPGTGDIQLTLAQRVPVTGAVIVTTPQ CCCEECCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCC DIALIDARKGLKMFEKVGIPIIGVVENMSLHICSNCGHEERIFGEGGGERMCRDYNVEFL CEEEEECHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCHHHCCCEEEE GALPLDSSIRADTDSGKPSVVSDPDGRVTEIYKQIARRVAVKIGETAVDHSAKFPNIVIS EECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEE NT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]