| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318064
Identifier: 74318064
GI number: 74318064
Start: 2134898
End: 2135521
Strand: Direct
Name: 74318064
Synonym: Tbd_2046
Alternate gene names: NA
Gene position: 2134898-2135521 (Clockwise)
Preceding gene: 74318063
Following gene: 74318065
Centisome position: 73.37
GC content: 71.47
Gene sequence:
>624_bases ATGAACTCGCCGATCCTCTGGTATTTCGCCGACCCGATGTGCTCGTGGTGCTGGGGGTTTTCGCCCGTAATCGAGGCGCT GCGCGAACGCTACGGCGCGCGCCTGCGCGTCGCGCTCGTGCTCGGCGGCTTGCGGCCCGGCGAGCGCGCGGCGCTCAGCG CGGCGGCCCGCGAAGACATCCTGCATCACTGGCATGCGGTCGCCGAACGGACCGGCCAGCCTTTCCGCTTCGACGGCGCG CTCGCGCCGGGTTTCGTTTACGACACCGAGCCCGCGAGCCGCGCGGTCGTCGCGGTCGGCGCGCTCGCACCCGGCCAGAT CTTCGCGATGTTCAAGGCGATCCAGCACGCGTTTTACGCCGAGGGACGCGACGTGACGCAGCCCGACGTGCTCGCCGCGC TCGCCGCCGGCTGCGGCATCGACACCCCGCGCTTCCAACCGGCCTTCGACAGCGACGACGCACGTGCGAAAACGCGCGCG CATTTCCGCCAGGCGCGCGCCGCCGGCGTGCACGGGTTTCCGGCCTTGATCCTGCAGCAGGACGATCGGCTGACCCGCGT CGGCGAGGGCTGCCAGCCTCGCGAGACGGTCGAGCGCGCGATCGACGCCTGTCTCAGCGCATGA
Upstream 100 bases:
>100_bases ATGGACGACGACAATCCGCGTGCGCCCGCCCCGCCTCCGCCCGGCGACGGCCCCGGGCGGGACGCGCCGAAATCCTGACC CGCCGACCCAAGGGCCCCGC
Downstream 100 bases:
>100_bases GCCGCGGACTGCGCGATTTCCCATCCCTTTTTGTTCGCCCCCGCTCACCCGTAGAATGCACGCGTTCCCCTCGCCCGGAG TGTTCCGATGAACCGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNSPILWYFADPMCSWCWGFSPVIEALRERYGARLRVALVLGGLRPGERAALSAAAREDILHHWHAVAERTGQPFRFDGA LAPGFVYDTEPASRAVVAVGALAPGQIFAMFKAIQHAFYAEGRDVTQPDVLAALAAGCGIDTPRFQPAFDSDDARAKTRA HFRQARAAGVHGFPALILQQDDRLTRVGEGCQPRETVERAIDACLSA
Sequences:
>Translated_207_residues MNSPILWYFADPMCSWCWGFSPVIEALRERYGARLRVALVLGGLRPGERAALSAAAREDILHHWHAVAERTGQPFRFDGA LAPGFVYDTEPASRAVVAVGALAPGQIFAMFKAIQHAFYAEGRDVTQPDVLAALAAGCGIDTPRFQPAFDSDDARAKTRA HFRQARAAGVHGFPALILQQDDRLTRVGEGCQPRETVERAIDACLSA >Mature_207_residues MNSPILWYFADPMCSWCWGFSPVIEALRERYGARLRVALVLGGLRPGERAALSAAAREDILHHWHAVAERTGQPFRFDGA LAPGFVYDTEPASRAVVAVGALAPGQIFAMFKAIQHAFYAEGRDVTQPDVLAALAAGCGIDTPRFQPAFDSDDARAKTRA HFRQARAAGVHGFPALILQQDDRLTRVGEGCQPRETVERAIDACLSA
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0413 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023169 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 22533; Mature: 22533
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPILWYFADPMCSWCWGFSPVIEALRERYGARLRVALVLGGLRPGERAALSAAAREDI CCCCEEEEECCHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHH LHHWHAVAERTGQPFRFDGALAPGFVYDTEPASRAVVAVGALAPGQIFAMFKAIQHAFYA HHHHHHHHHHCCCCEEECCCCCCCEEECCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHH EGRDVTQPDVLAALAAGCGIDTPRFQPAFDSDDARAKTRAHFRQARAAGVHGFPALILQQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC DDRLTRVGEGCQPRETVERAIDACLSA CCHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNSPILWYFADPMCSWCWGFSPVIEALRERYGARLRVALVLGGLRPGERAALSAAAREDI CCCCEEEEECCHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHH LHHWHAVAERTGQPFRFDGALAPGFVYDTEPASRAVVAVGALAPGQIFAMFKAIQHAFYA HHHHHHHHHHCCCCEEECCCCCCCEEECCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHH EGRDVTQPDVLAALAAGCGIDTPRFQPAFDSDDARAKTRAHFRQARAAGVHGFPALILQQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC DDRLTRVGEGCQPRETVERAIDACLSA CCHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]