| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fccA [H]
Identifier: 74318052
GI number: 74318052
Start: 2125331
End: 2125627
Strand: Direct
Name: fccA [H]
Synonym: Tbd_2034
Alternate gene names: 74318052
Gene position: 2125331-2125627 (Clockwise)
Preceding gene: 74318051
Following gene: 74318053
Centisome position: 73.04
GC content: 68.35
Gene sequence:
>297_bases ATGACGCCGTCCTCCGCCGTCGCAAGCTGTCTGCTCCTCGCCCTGTCCGGCTTCGCGGTCGCTGCCGACCGTCATACGCT GACGATCGCGGCGACCTGCATGTCCTGCCACGGCCCGGACGGACGAAGCCTCGGCGAGATCCCGCGACTGGATGGCCTGA GCAGGACCGAGTTCGTCACGGCCCTACGCGATTTCCGGTCAGGCGCGCGCCGCGCGACGATCATGCAGCGCCAGGCGAGC GGCTACACCGACGCCGAAATCGACGCCCTCGGCGACTACTTCGCCACCCTGAAATAG
Upstream 100 bases:
>100_bases GAAGCCGCGCGCTCGCGCTGGGCGCGCAACGCTGAGAAATACGCTATAAAAAAACCTGTCCGCGCCGCGGGCCCCTCGGA AGCCGAACCGACCAACCCAA
Downstream 100 bases:
>100_bases GCTTGCGCGTTCATGCACCTCGACCGGCGTGACTTTCTCAAGCTTTCCGCGGCGACAGCCCTCGCGGCCCTGCCGGGCTG CGCGTCGCTGTCCGGCACCG
Product: sulfide dehydrogenase (flavocytochrome), cytochrome c subunit
Products: NA
Alternate protein names: FCSD; FC; Flavocytochrome c cytochrome subunit [H]
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTPSSAVASCLLLALSGFAVAADRHTLTIAATCMSCHGPDGRSLGEIPRLDGLSRTEFVTALRDFRSGARRATIMQRQAS GYTDAEIDALGDYFATLK
Sequences:
>Translated_98_residues MTPSSAVASCLLLALSGFAVAADRHTLTIAATCMSCHGPDGRSLGEIPRLDGLSRTEFVTALRDFRSGARRATIMQRQAS GYTDAEIDALGDYFATLK >Mature_97_residues TPSSAVASCLLLALSGFAVAADRHTLTIAATCMSCHGPDGRSLGEIPRLDGLSRTEFVTALRDFRSGARRATIMQRQASG YTDAEIDALGDYFATLK
Specific function: Monoheme cytochrome that function as the electron transport subunit of sulfide dehydrogenase [H]
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 10396; Mature: 10265
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSSAVASCLLLALSGFAVAADRHTLTIAATCMSCHGPDGRSLGEIPRLDGLSRTEFVT CCCHHHHHHHHHHHHHCHHEECCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH ALRDFRSGARRATIMQRQASGYTDAEIDALGDYFATLK HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TPSSAVASCLLLALSGFAVAADRHTLTIAATCMSCHGPDGRSLGEIPRLDGLSRTEFVT CCHHHHHHHHHHHHHCHHEECCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH ALRDFRSGARRATIMQRQASGYTDAEIDALGDYFATLK HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2161842 [H]