| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ppnK
Identifier: 74318049
GI number: 74318049
Start: 2122157
End: 2123029
Strand: Reverse
Name: ppnK
Synonym: Tbd_2031
Alternate gene names: 74318049
Gene position: 2123029-2122157 (Counterclockwise)
Preceding gene: 74318054
Following gene: 74318048
Centisome position: 72.96
GC content: 66.67
Gene sequence:
>873_bases ATGCAGATTCCTTTCCACACCGTCGGCCTCGTCGGCAAATACGACAACCAGGGCATGGAGGCCTCGGTCCGCGCGCTTGC CGAATTCCTGCGCGGACGCGGGCACGCCGTCGTGCTCGCGTGCCAGACGGCGGAACATTTCGGCATCACCGATTTCCCGA CGCGCAACCTGCACGACCTCGCGACCGAGAGCGACGCCGTCGTCGTGTTGGGGGGGGACGGCACGATGCTCTCGATCGCG CGCGAACTCTCGGCCCACGGCGTGCCGTTGATCGGCATCAACCAGGGCCGGCTCGGCTTTCTGACCGACATCACCGTCGA CCACATGTACGACGCGGTCGACGAGATCCTGAGCGGGCAATACGTCGCCGAAGAACGCATCCTGCTCAAGGGACAGATCC TGCGCGGCGGCGAGCGGGTCTTTGAGGCGACCGCATTCAACGACGTCGTCGTCGGCAAGGGCGGCTCGGGGCGGCTGATC GACCTCGAAATCGCGATCGACGGCGAGTTCGTCTACAGCCAGCGTGCCGACGGCCTGGTCGTCACGACCCCGACCGGAAC GACCGCGTATGCCTTGTCCGCCGGCGGGCCGATCGTGCACCCGACCCTCGAAGCGGTCGCGCTCGTGCCGATCTGCCCGC ATACGCTGTCGGCGCGGCCGATCGTCGTCAGCGGCCGTTCGCGCATCGAGCTGCACCTGACCTACGCCGACGACGCGCGC GTCCACTTCGACGGCCAGCATCACTTCGACCTGCAAAGCGGCGACCACGTCTGGATCACGCGGGCGAACCGCCCGATCAC GCTGCTGCATCCGCATTCCTACAGCTACTACGACACCCTGCGGCAGAAGCTGCACTGGGGCAAGAAGCTCTGA
Upstream 100 bases:
>100_bases AGGGACGGCGGCTCCGGTCAGACCCGCTTCGGCCGCGGCCAGCGAGGCGGCACACGCGCGGGTCCGGAATCCTCGTCCGG CCCCTTTATAATCCTTCCCC
Downstream 100 bases:
>100_bases GCGAGAAGATGGCCGTCCCGAGCGATCCTTGCGCGCACGCGGTGCCCGGCTGCGATGCGGGCGCCGCAAAGCTGGCCGGA CGTCGGCCGCAGGGAGACTG
Product: NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQIPFHTVGLVGKYDNQGMEASVRALAEFLRGRGHAVVLACQTAEHFGITDFPTRNLHDLATESDAVVVLGGDGTMLSIA RELSAHGVPLIGINQGRLGFLTDITVDHMYDAVDEILSGQYVAEERILLKGQILRGGERVFEATAFNDVVVGKGGSGRLI DLEIAIDGEFVYSQRADGLVVTTPTGTTAYALSAGGPIVHPTLEAVALVPICPHTLSARPIVVSGRSRIELHLTYADDAR VHFDGQHHFDLQSGDHVWITRANRPITLLHPHSYSYYDTLRQKLHWGKKL
Sequences:
>Translated_290_residues MQIPFHTVGLVGKYDNQGMEASVRALAEFLRGRGHAVVLACQTAEHFGITDFPTRNLHDLATESDAVVVLGGDGTMLSIA RELSAHGVPLIGINQGRLGFLTDITVDHMYDAVDEILSGQYVAEERILLKGQILRGGERVFEATAFNDVVVGKGGSGRLI DLEIAIDGEFVYSQRADGLVVTTPTGTTAYALSAGGPIVHPTLEAVALVPICPHTLSARPIVVSGRSRIELHLTYADDAR VHFDGQHHFDLQSGDHVWITRANRPITLLHPHSYSYYDTLRQKLHWGKKL >Mature_290_residues MQIPFHTVGLVGKYDNQGMEASVRALAEFLRGRGHAVVLACQTAEHFGITDFPTRNLHDLATESDAVVVLGGDGTMLSIA RELSAHGVPLIGINQGRLGFLTDITVDHMYDAVDEILSGQYVAEERILLKGQILRGGERVFEATAFNDVVVGKGGSGRLI DLEIAIDGEFVYSQRADGLVVTTPTGTTAYALSAGGPIVHPTLEAVALVPICPHTLSARPIVVSGRSRIELHLTYADDAR VHFDGQHHFDLQSGDHVWITRANRPITLLHPHSYSYYDTLRQKLHWGKKL
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=262, Percent_Identity=31.2977099236641, Blast_Score=121, Evalue=7e-28, Organism=Escherichia coli, GI1788968, Length=287, Percent_Identity=40.0696864111498, Blast_Score=229, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6322509, Length=240, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320794, Length=242, Percent_Identity=28.9256198347107, Blast_Score=132, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6325068, Length=219, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=6e-28, Organism=Drosophila melanogaster, GI20129957, Length=278, Percent_Identity=30.9352517985612, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI281363321, Length=278, Percent_Identity=30.9352517985612, Blast_Score=120, Evalue=9e-28, Organism=Drosophila melanogaster, GI281363323, Length=278, Percent_Identity=30.9352517985612, Blast_Score=120, Evalue=9e-28, Organism=Drosophila melanogaster, GI24653422, Length=278, Percent_Identity=30.9352517985612, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24653424, Length=278, Percent_Identity=30.9352517985612, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI28573832, Length=253, Percent_Identity=32.0158102766798, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI161077047, Length=253, Percent_Identity=32.0158102766798, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI28573830, Length=253, Percent_Identity=32.0158102766798, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI28573828, Length=253, Percent_Identity=32.0158102766798, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI28573826, Length=253, Percent_Identity=32.0158102766798, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_THIDA (Q3SHA5)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315789.1 - ProteinModelPortal: Q3SHA5 - SMR: Q3SHA5 - STRING: Q3SHA5 - GeneID: 3672202 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_2031 - NMPDR: fig|292415.3.peg.2171 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: FESFMID - PhylomeDB: Q3SHA5 - BioCyc: TDEN292415:TBD_2031-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 31603; Mature: 31603
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPFHTVGLVGKYDNQGMEASVRALAEFLRGRGHAVVLACQTAEHFGITDFPTRNLHDL CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHH ATESDAVVVLGGDGTMLSIARELSAHGVPLIGINQGRLGFLTDITVDHMYDAVDEILSGQ CCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCC YVAEERILLKGQILRGGERVFEATAFNDVVVGKGGSGRLIDLEIAIDGEFVYSQRADGLV EEECCEEEEEEEEECCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCEEEEECCCCCEE VTTPTGTTAYALSAGGPIVHPTLEAVALVPICPHTLSARPIVVSGRSRIELHLTYADDAR EECCCCCEEEEEECCCCEECCCHHEEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCE VHFDGQHHFDLQSGDHVWITRANRPITLLHPHSYSYYDTLRQKLHWGKKL EEECCCEEEECCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MQIPFHTVGLVGKYDNQGMEASVRALAEFLRGRGHAVVLACQTAEHFGITDFPTRNLHDL CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHH ATESDAVVVLGGDGTMLSIARELSAHGVPLIGINQGRLGFLTDITVDHMYDAVDEILSGQ CCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCC YVAEERILLKGQILRGGERVFEATAFNDVVVGKGGSGRLIDLEIAIDGEFVYSQRADGLV EEECCEEEEEEEEECCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCEEEEECCCCCEE VTTPTGTTAYALSAGGPIVHPTLEAVALVPICPHTLSARPIVVSGRSRIELHLTYADDAR EECCCCCEEEEEECCCCEECCCHHEEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCE VHFDGQHHFDLQSGDHVWITRANRPITLLHPHSYSYYDTLRQKLHWGKKL EEECCCEEEECCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA