Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318020

Identifier: 74318020

GI number: 74318020

Start: 2090388

End: 2091401

Strand: Reverse

Name: 74318020

Synonym: Tbd_2002

Alternate gene names: NA

Gene position: 2091401-2090388 (Counterclockwise)

Preceding gene: 74318021

Following gene: 74318019

Centisome position: 71.87

GC content: 57.89

Gene sequence:

>1014_bases
ATGAGCTCAGACCGGCAATATCTGCGCCTCAAGAAATTGGTGGGCAGGGATATTGTTCGCGTCGCTTCGAAACACAACCT
ACGAGAGCTTCAGGCCGAGTTGGGGGCAGGAAGCCATATCGACCACACCCGTATTGGCCTTAATCGGGTCGTAGCTGGGC
CGGACCGTGCTGACGATGTTGCGGCCGAGGCGGAACGGCTGATGCACAGCGCCGGGGTAGCACGGCTGCGACGCGACGCG
GTTCGCGGCGTTGAAATAATCGTCAGCCTGCCGTCGTCATCGACCATCGACCCCGAGTCCTTTTTTTCCGAGTCGCTGGC
TTGGGTGCAGGGTTTCTTCTCCGTGCCGGTCTTGTCCGCTGTGATTCACCTCGACGAAGCTGCGCCGCATTTCCATGTAT
TGCTGCTGCCGCTGGTTGACGGGCGTATGGCCGGAAGCGACCTCGTGGGCAACAGAACCCGCCTACACGCTATGCAAACG
AGTTTCTTCGAACAGGTGGGACGCGGGTACGGGCTGACCCGTCCGAAAGTGCAGAAGCGTTTGAATCCGGCGACAAGGAA
TAAAGCCGCCTCGTTGATTATGACGGCGCTCCAGAGCAGCCCGGAGATGTTGTTGCGGCCAGAAGTCGAAAACGCCTTGC
TGGATCTTCTGAAGCCTAATCCTGCGCCCATGCTCACGGCATTGAGTTTGCCGATGCCGCTGCGGGAAATGGAGCGACAA
ACGTTTGTCGGAATCATGACCAAGCCTTGCAAACCTGAGAAGCCTATAGGGCTTGGTCGCGATTCCAAGCCTATAGGGTT
TGCGGAGGTGTCACCCAAAAAACGTCGATCCCTATCCTGTGTAGGGTTCGCTAGAAAGCCGTCACCTTTGCCCGACCCTG
AAAGTCATCCTGAGGAGACTAGCAGCGAAGAGTTTACCCGTTGCCACGACGATGTTCCTTCGGCGTACTGGGATAGTGAG
CGCGGGGAGTACCGACTGCCGGCAGTGCCCACTCGACAAACACAGCTTGGATGA

Upstream 100 bases:

>100_bases
GCGCGAGGGGCTTCGAGATTGTAACGATATGGACGAATGCGCCGACCGAGTGCGGGCGTAGGCATCGCGTTGCCCGCTAT
GTGTTGATGAAGGTGGCGCC

Downstream 100 bases:

>100_bases
AGTGGAAGCCCTTTAATGGCGCGGATTTCGAGCCGGTTCGAGTTCGGTATCCAGATTTTCTTCCTAATGATTTCGTATTC
TGTGAGGGCTGAATAATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSSDRQYLRLKKLVGRDIVRVASKHNLRELQAELGAGSHIDHTRIGLNRVVAGPDRADDVAAEAERLMHSAGVARLRRDA
VRGVEIIVSLPSSSTIDPESFFSESLAWVQGFFSVPVLSAVIHLDEAAPHFHVLLLPLVDGRMAGSDLVGNRTRLHAMQT
SFFEQVGRGYGLTRPKVQKRLNPATRNKAASLIMTALQSSPEMLLRPEVENALLDLLKPNPAPMLTALSLPMPLREMERQ
TFVGIMTKPCKPEKPIGLGRDSKPIGFAEVSPKKRRSLSCVGFARKPSPLPDPESHPEETSSEEFTRCHDDVPSAYWDSE
RGEYRLPAVPTRQTQLG

Sequences:

>Translated_337_residues
MSSDRQYLRLKKLVGRDIVRVASKHNLRELQAELGAGSHIDHTRIGLNRVVAGPDRADDVAAEAERLMHSAGVARLRRDA
VRGVEIIVSLPSSSTIDPESFFSESLAWVQGFFSVPVLSAVIHLDEAAPHFHVLLLPLVDGRMAGSDLVGNRTRLHAMQT
SFFEQVGRGYGLTRPKVQKRLNPATRNKAASLIMTALQSSPEMLLRPEVENALLDLLKPNPAPMLTALSLPMPLREMERQ
TFVGIMTKPCKPEKPIGLGRDSKPIGFAEVSPKKRRSLSCVGFARKPSPLPDPESHPEETSSEEFTRCHDDVPSAYWDSE
RGEYRLPAVPTRQTQLG
>Mature_336_residues
SSDRQYLRLKKLVGRDIVRVASKHNLRELQAELGAGSHIDHTRIGLNRVVAGPDRADDVAAEAERLMHSAGVARLRRDAV
RGVEIIVSLPSSSTIDPESFFSESLAWVQGFFSVPVLSAVIHLDEAAPHFHVLLLPLVDGRMAGSDLVGNRTRLHAMQTS
FFEQVGRGYGLTRPKVQKRLNPATRNKAASLIMTALQSSPEMLLRPEVENALLDLLKPNPAPMLTALSLPMPLREMERQT
FVGIMTKPCKPEKPIGLGRDSKPIGFAEVSPKKRRSLSCVGFARKPSPLPDPESHPEETSSEEFTRCHDDVPSAYWDSER
GEYRLPAVPTRQTQLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37256; Mature: 37125

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDRQYLRLKKLVGRDIVRVASKHNLRELQAELGAGSHIDHTRIGLNRVVAGPDRADDV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHH
AAEAERLMHSAGVARLRRDAVRGVEIIVSLPSSSTIDPESFFSESLAWVQGFFSVPVLSA
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VIHLDEAAPHFHVLLLPLVDGRMAGSDLVGNRTRLHAMQTSFFEQVGRGYGLTRPKVQKR
HHHHHCCCCCEEEEEEEHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LNPATRNKAASLIMTALQSSPEMLLRPEVENALLDLLKPNPAPMLTALSLPMPLREMERQ
CCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHH
TFVGIMTKPCKPEKPIGLGRDSKPIGFAEVSPKKRRSLSCVGFARKPSPLPDPESHPEET
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCC
SSEEFTRCHDDVPSAYWDSERGEYRLPAVPTRQTQLG
CHHHHHHHHHCCCCHHCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SSDRQYLRLKKLVGRDIVRVASKHNLRELQAELGAGSHIDHTRIGLNRVVAGPDRADDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHH
AAEAERLMHSAGVARLRRDAVRGVEIIVSLPSSSTIDPESFFSESLAWVQGFFSVPVLSA
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VIHLDEAAPHFHVLLLPLVDGRMAGSDLVGNRTRLHAMQTSFFEQVGRGYGLTRPKVQKR
HHHHHCCCCCEEEEEEEHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LNPATRNKAASLIMTALQSSPEMLLRPEVENALLDLLKPNPAPMLTALSLPMPLREMERQ
CCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHH
TFVGIMTKPCKPEKPIGLGRDSKPIGFAEVSPKKRRSLSCVGFARKPSPLPDPESHPEET
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCC
SSEEFTRCHDDVPSAYWDSERGEYRLPAVPTRQTQLG
CHHHHHHHHHCCCCHHCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA