| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318019
Identifier: 74318019
GI number: 74318019
Start: 2089660
End: 2090292
Strand: Reverse
Name: 74318019
Synonym: Tbd_2001
Alternate gene names: NA
Gene position: 2090292-2089660 (Counterclockwise)
Preceding gene: 74318020
Following gene: 74318017
Centisome position: 71.84
GC content: 59.08
Gene sequence:
>633_bases ATGGGTACTGGCGGCATGAGATACGGCGCAGGCCGTCCGGGATGGAAGCGAAAGGCCGAACAGTCGTTGGCATTCGACGT GCGGCAGATCGCCAAGAAAGGGCTGCTGCGGCGGGGGGCTTTTTCATGGCAATGGTCAAATAACTACGGGGAGAAAATCG GCAGCGTGGGCGTGCGTGTTGCTGGTGATCCCGAGCGAGTTATCCTTGCTTACCAGTGGACGCCCTATAACGGCGAGCCG CGCCATGTTGAATGCTCGCTATGGATAGCGCACTCGCCATGCAATTACGGCGGTTCCCGTCCGTGGTTTCTGTGCCCTTC ATGCGGGCGGCGCTGCGCCTTGGTCTATTACGGCGCACCTGGCGGGCGCTATGCGTGTCGTCGCTGCGTTCGTGTTACCT ACCTCAGCCAATGCGACGATGAAATGGCGCGGTTATGGCGCAGGCAGCGCAAGCTTGAACGCAAGTTGGCTGAGGGCGCT GATGAGTGGAACGGTTGGGAGCGGCCCAAGGGGATGCACCAGAAGACCTTTGATCGCCTGCGTAATCAGATATGGGAACT GGAAATGCGGAGGGATGAAGTGTTCGAGACTCAGGCCGCTTCCTTGTTGGGGCGATTGGGCGTTCTTATCTAA
Upstream 100 bases:
>100_bases GATGAAGTGGAAGCCCTTTAATGGCGCGGATTTCGAGCCGGTTCGAGTTCGGTATCCAGATTTTCTTCCTAATGATTTCG TATTCTGTGAGGGCTGAATA
Downstream 100 bases:
>100_bases ACCAGGCCGATACTTGCTTGCGGCCTCGCACCATGCCACCGAGCAAGCTCAATCCCGCTAAAAACATTATGAAGGAATGG GGTTCTGGGACGCTGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGTGGMRYGAGRPGWKRKAEQSLAFDVRQIAKKGLLRRGAFSWQWSNNYGEKIGSVGVRVAGDPERVILAYQWTPYNGEP RHVECSLWIAHSPCNYGGSRPWFLCPSCGRRCALVYYGAPGGRYACRRCVRVTYLSQCDDEMARLWRRQRKLERKLAEGA DEWNGWERPKGMHQKTFDRLRNQIWELEMRRDEVFETQAASLLGRLGVLI
Sequences:
>Translated_210_residues MGTGGMRYGAGRPGWKRKAEQSLAFDVRQIAKKGLLRRGAFSWQWSNNYGEKIGSVGVRVAGDPERVILAYQWTPYNGEP RHVECSLWIAHSPCNYGGSRPWFLCPSCGRRCALVYYGAPGGRYACRRCVRVTYLSQCDDEMARLWRRQRKLERKLAEGA DEWNGWERPKGMHQKTFDRLRNQIWELEMRRDEVFETQAASLLGRLGVLI >Mature_209_residues GTGGMRYGAGRPGWKRKAEQSLAFDVRQIAKKGLLRRGAFSWQWSNNYGEKIGSVGVRVAGDPERVILAYQWTPYNGEPR HVECSLWIAHSPCNYGGSRPWFLCPSCGRRCALVYYGAPGGRYACRRCVRVTYLSQCDDEMARLWRRQRKLERKLAEGAD EWNGWERPKGMHQKTFDRLRNQIWELEMRRDEVFETQAASLLGRLGVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24249; Mature: 24118
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTGGMRYGAGRPGWKRKAEQSLAFDVRQIAKKGLLRRGAFSWQWSNNYGEKIGSVGVRV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCEEE AGDPERVILAYQWTPYNGEPRHVECSLWIAHSPCNYGGSRPWFLCPSCGRRCALVYYGAP ECCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEECCC GGRYACRRCVRVTYLSQCDDEMARLWRRQRKLERKLAEGADEWNGWERPKGMHQKTFDRL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHH RNQIWELEMRRDEVFETQAASLLGRLGVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTGGMRYGAGRPGWKRKAEQSLAFDVRQIAKKGLLRRGAFSWQWSNNYGEKIGSVGVRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCEEE AGDPERVILAYQWTPYNGEPRHVECSLWIAHSPCNYGGSRPWFLCPSCGRRCALVYYGAP ECCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEECCC GGRYACRRCVRVTYLSQCDDEMARLWRRQRKLERKLAEGADEWNGWERPKGMHQKTFDRL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHH RNQIWELEMRRDEVFETQAASLLGRLGVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA