Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317996

Identifier: 74317996

GI number: 74317996

Start: 2070263

End: 2071837

Strand: Direct

Name: 74317996

Synonym: Tbd_1978

Alternate gene names: NA

Gene position: 2070263-2071837 (Clockwise)

Preceding gene: 74317995

Following gene: 74317997

Centisome position: 71.15

GC content: 74.48

Gene sequence:

>1575_bases
ATGGCCGGCCCCGAGCACACACCGCCCGGCGCGGCGCTGCAGGCCGACGTCGAGACGCGGCCGAAGGCGGTCGCGGCCTG
GCTCGAGCGCCTGCCTTACGCGAGCCCGGCCGACGCCGCGCGCCAGCTCGTCACGGCCTTGTATGGCCTCAACCGCCATC
CGCTCGACGAGGACGCGCGCTACACGCTGCTCGCCCTCTACCGCCCGGCGCTCGCGCGCGCGGCCGCCGGCCTCGAGGGC
CTGCTCGGCGAGGGCGGCGTGCCGCCGCAGCCGCAGCATAGACAACTGGGCGCGCTGCTGCGCGGCCTGCACAGCGAGCA
TGCCCTCGGCTGCAAGCAGGTGCTCGACACGCGTCCGCGCCGCTTCGGCCGCGCCAGCCCGAAGCGCATCGCCGCCGCCG
CCACGCAGCAGATGGCCGCGCTGCGCGACCTGCAGGCGGCCTGCTACCTCACGCACACGAGCCTCCCGCCCGGGCTATGG
CAGGACCTGCACCGGCTGTACGCCTTCGTCGAGGCATCGAAGCGCGCCGAGCCCACGAAACGCACGGGTTCCGACGTCGA
CGACGCCGAGCCGGCCGACCTCGTCTACCGCCAGGCGCTGCTGCTCGCGCTCGCCGACCCGCCGCACATGACCCACGCCG
AGCGCATGCAGACGCGGGTCTATCTCGACCAGCTCGCCGGGCTCGCGCGGCTCGGCGCGCCGCCTGCGGGCGGCGGGCGC
GGCTTCCTGATCCGCACCGACGGCGATGCTGCGCCGAGCGCCTTCACGGTCGGCACGGCGGCAGGCGCGCTCTGGCTCGA
TACCGATGCGCTCTGCCGCACGCTCCAGGAAACGCTCGCGCGGCGCAACGGCGGCAAGGCATCGGGGTTGTCAGGCGCGG
TCGACGACGAAGCCTCGCTCAAGCTCTTCACGCGCCTGCTCAGGCAATGGAGCGGCCCGGCGCAGCGCAGCTTCAGGCGC
TACGCCGCGGGCGGCGGCACCGTGCAGCTGGTCGCCGGCCTCAGCACGATCCATCGCCTGCTCGACGGTCTCGGCCCGGC
CCCACGGCCCGATGGTGCCGGCGGCGCGAGCGCCGAGCCTGGCGCGCCGGGCGCGGCCGCGCCCATCGTCGTCAACGCGA
CCGACTGGACCGTGACCAACGACAGCGCCGCGGGGCTCGCGCTTCTCGGCGCGCCGAACGCGCCGCTCAACCTTAAAGCC
GGCGACGCGCTCGCGCTGCGCACCGACGCGGGGGAATGGTCGCTCGCGGTGGTGCGCTGGGTGCGCATGCGCGATGCGGA
CGGCGGCGAGATCGAGCTCGGCGTCGAGCGCCTCGCGCCGCGCGTGCGCCCGCTCTGGCTGCGCGCCCTGAACGGCAAGC
GGTCACGCACGGAACCCGCGCTGCTGCTTCCGGGTCTGCCGGCCCTGAAGCAGCCCGATCGCCTGCTGCTGCCGCGCCGG
GTCTACCATGTCGGCATGGACGCGGACGTGTGGGACGAGGCGCGCCGCTACACGCTCACCTTCGGCCGGCTGCTCGAGCA
GACCCCGAGTTTCGACCTGGTCGATTTCACCCTATTCGAAGAGGCCCAGCCATGA

Upstream 100 bases:

>100_bases
GGGCGGACCTCGAGAAGGTCGTGCTGTCGCGTGCCGTGAAATGGCATCTCGACAACCGGGTGCTGGTCTACGCGAACAAG
ACCGTCGTCTTCGACTGAGA

Downstream 100 bases:

>100_bases
CGGAAATTCTTGTGCTGTATTACAGCGTCGGCGGCAGCGTGCGCGAGATGGCGCACCTGGTCGCCCGCGGCGTCAACCAC
GTCGAGGGCGCGAGTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MAGPEHTPPGAALQADVETRPKAVAAWLERLPYASPADAARQLVTALYGLNRHPLDEDARYTLLALYRPALARAAAGLEG
LLGEGGVPPQPQHRQLGALLRGLHSEHALGCKQVLDTRPRRFGRASPKRIAAAATQQMAALRDLQAACYLTHTSLPPGLW
QDLHRLYAFVEASKRAEPTKRTGSDVDDAEPADLVYRQALLLALADPPHMTHAERMQTRVYLDQLAGLARLGAPPAGGGR
GFLIRTDGDAAPSAFTVGTAAGALWLDTDALCRTLQETLARRNGGKASGLSGAVDDEASLKLFTRLLRQWSGPAQRSFRR
YAAGGGTVQLVAGLSTIHRLLDGLGPAPRPDGAGGASAEPGAPGAAAPIVVNATDWTVTNDSAAGLALLGAPNAPLNLKA
GDALALRTDAGEWSLAVVRWVRMRDADGGEIELGVERLAPRVRPLWLRALNGKRSRTEPALLLPGLPALKQPDRLLLPRR
VYHVGMDADVWDEARRYTLTFGRLLEQTPSFDLVDFTLFEEAQP

Sequences:

>Translated_524_residues
MAGPEHTPPGAALQADVETRPKAVAAWLERLPYASPADAARQLVTALYGLNRHPLDEDARYTLLALYRPALARAAAGLEG
LLGEGGVPPQPQHRQLGALLRGLHSEHALGCKQVLDTRPRRFGRASPKRIAAAATQQMAALRDLQAACYLTHTSLPPGLW
QDLHRLYAFVEASKRAEPTKRTGSDVDDAEPADLVYRQALLLALADPPHMTHAERMQTRVYLDQLAGLARLGAPPAGGGR
GFLIRTDGDAAPSAFTVGTAAGALWLDTDALCRTLQETLARRNGGKASGLSGAVDDEASLKLFTRLLRQWSGPAQRSFRR
YAAGGGTVQLVAGLSTIHRLLDGLGPAPRPDGAGGASAEPGAPGAAAPIVVNATDWTVTNDSAAGLALLGAPNAPLNLKA
GDALALRTDAGEWSLAVVRWVRMRDADGGEIELGVERLAPRVRPLWLRALNGKRSRTEPALLLPGLPALKQPDRLLLPRR
VYHVGMDADVWDEARRYTLTFGRLLEQTPSFDLVDFTLFEEAQP
>Mature_523_residues
AGPEHTPPGAALQADVETRPKAVAAWLERLPYASPADAARQLVTALYGLNRHPLDEDARYTLLALYRPALARAAAGLEGL
LGEGGVPPQPQHRQLGALLRGLHSEHALGCKQVLDTRPRRFGRASPKRIAAAATQQMAALRDLQAACYLTHTSLPPGLWQ
DLHRLYAFVEASKRAEPTKRTGSDVDDAEPADLVYRQALLLALADPPHMTHAERMQTRVYLDQLAGLARLGAPPAGGGRG
FLIRTDGDAAPSAFTVGTAAGALWLDTDALCRTLQETLARRNGGKASGLSGAVDDEASLKLFTRLLRQWSGPAQRSFRRY
AAGGGTVQLVAGLSTIHRLLDGLGPAPRPDGAGGASAEPGAPGAAAPIVVNATDWTVTNDSAAGLALLGAPNAPLNLKAG
DALALRTDAGEWSLAVVRWVRMRDADGGEIELGVERLAPRVRPLWLRALNGKRSRTEPALLLPGLPALKQPDRLLLPRRV
YHVGMDADVWDEARRYTLTFGRLLEQTPSFDLVDFTLFEEAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56036; Mature: 55905

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPEHTPPGAALQADVETRPKAVAAWLERLPYASPADAARQLVTALYGLNRHPLDEDAR
CCCCCCCCCCCEEECCCHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
YTLLALYRPALARAAAGLEGLLGEGGVPPQPQHRQLGALLRGLHSEHALGCKQVLDTRPR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RFGRASPKRIAAAATQQMAALRDLQAACYLTHTSLPPGLWQDLHRLYAFVEASKRAEPTK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
RTGSDVDDAEPADLVYRQALLLALADPPHMTHAERMQTRVYLDQLAGLARLGAPPAGGGR
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GFLIRTDGDAAPSAFTVGTAAGALWLDTDALCRTLQETLARRNGGKASGLSGAVDDEASL
EEEEEECCCCCCCEEEHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
KLFTRLLRQWSGPAQRSFRRYAAGGGTVQLVAGLSTIHRLLDGLGPAPRPDGAGGASAEP
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GAPGAAAPIVVNATDWTVTNDSAAGLALLGAPNAPLNLKAGDALALRTDAGEWSLAVVRW
CCCCCCCCEEEECCCEEEECCCCCCEEEEECCCCCCEECCCCEEEEECCCCCHHHHHHHH
VRMRDADGGEIELGVERLAPRVRPLWLRALNGKRSRTEPALLLPGLPALKQPDRLLLPRR
HHHCCCCCCEEEECHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHCCHH
VYHVGMDADVWDEARRYTLTFGRLLEQTPSFDLVDFTLFEEAQP
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCC
>Mature Secondary Structure 
AGPEHTPPGAALQADVETRPKAVAAWLERLPYASPADAARQLVTALYGLNRHPLDEDAR
CCCCCCCCCCEEECCCHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
YTLLALYRPALARAAAGLEGLLGEGGVPPQPQHRQLGALLRGLHSEHALGCKQVLDTRPR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RFGRASPKRIAAAATQQMAALRDLQAACYLTHTSLPPGLWQDLHRLYAFVEASKRAEPTK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
RTGSDVDDAEPADLVYRQALLLALADPPHMTHAERMQTRVYLDQLAGLARLGAPPAGGGR
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GFLIRTDGDAAPSAFTVGTAAGALWLDTDALCRTLQETLARRNGGKASGLSGAVDDEASL
EEEEEECCCCCCCEEEHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
KLFTRLLRQWSGPAQRSFRRYAAGGGTVQLVAGLSTIHRLLDGLGPAPRPDGAGGASAEP
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GAPGAAAPIVVNATDWTVTNDSAAGLALLGAPNAPLNLKAGDALALRTDAGEWSLAVVRW
CCCCCCCCEEEECCCEEEECCCCCCEEEEECCCCCCEECCCCEEEEECCCCCHHHHHHHH
VRMRDADGGEIELGVERLAPRVRPLWLRALNGKRSRTEPALLLPGLPALKQPDRLLLPRR
HHHCCCCCCEEEECHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHCCHH
VYHVGMDADVWDEARRYTLTFGRLLEQTPSFDLVDFTLFEEAQP
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA