Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317982

Identifier: 74317982

GI number: 74317982

Start: 2056573

End: 2057115

Strand: Reverse

Name: 74317982

Synonym: Tbd_1964

Alternate gene names: NA

Gene position: 2057115-2056573 (Counterclockwise)

Preceding gene: 74317983

Following gene: 74317981

Centisome position: 70.7

GC content: 56.35

Gene sequence:

>543_bases
ATGAAAAACTCGTTTTGGGCTGCTGCCAGTGCAGTGGGCCTTGTTGTGCTTGGTTCCCTGTTTGTCCAGACCGCCCAGGC
TGCGGCACAGGTTTATACCTTTACGGCGTCCAACTTCACCTCGTATAACGGTACGCCCGTGCCCTATGCCGCCATTTCGG
GTCATGTGACGCTCGACGGCACCAACGTCACCGGTCTTAATCTGACCATCGGGGATCGCACTTATTCGCCCTCGGAGGTC
GGTTACTTTGCACTGGATTACCCTGCCGGGTCTTCGGGCGTCGTGGGCGCCTACAAGGCGACAAGTTGGGATGATGCACG
CAGCGTGAGCACGAACACGGACGATTTCATGTTGCAGGCTGACTTTGCCAATCCGCAGAATTTCGCAGGCTTCACTTACA
GCGTCGCAGCTTTGAACGATATTTTCGATTCGACAAACGTCTCAATTTCCGTGTCGGCTGTGCCTGAACCCGACATATAC
GCGATGCTGGCATCCGGACTTGGGATGCTGGTGGTGGCCGTGCGTCGCAAGCGGCGCGAATAA

Upstream 100 bases:

>100_bases
GGAAAAGGTTTCCCTGATGAATCATGGATATGCCATTAAGAGCGCCACGGGAACAGGTTTTGCTTATATCCCGGCCAACA
ATAACCAGGGGGAGGTAACT

Downstream 100 bases:

>100_bases
CCCAGCTGGAAAACAATAAAGGGTATAGGGCCAGACCACGGTTTCCAGCATTCGGACCAGAGGGGCTTGGCCCGGCCAAT
CAAGCAAGCAGTAGGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKNSFWAAASAVGLVVLGSLFVQTAQAAAQVYTFTASNFTSYNGTPVPYAAISGHVTLDGTNVTGLNLTIGDRTYSPSEV
GYFALDYPAGSSGVVGAYKATSWDDARSVSTNTDDFMLQADFANPQNFAGFTYSVAALNDIFDSTNVSISVSAVPEPDIY
AMLASGLGMLVVAVRRKRRE

Sequences:

>Translated_180_residues
MKNSFWAAASAVGLVVLGSLFVQTAQAAAQVYTFTASNFTSYNGTPVPYAAISGHVTLDGTNVTGLNLTIGDRTYSPSEV
GYFALDYPAGSSGVVGAYKATSWDDARSVSTNTDDFMLQADFANPQNFAGFTYSVAALNDIFDSTNVSISVSAVPEPDIY
AMLASGLGMLVVAVRRKRRE
>Mature_180_residues
MKNSFWAAASAVGLVVLGSLFVQTAQAAAQVYTFTASNFTSYNGTPVPYAAISGHVTLDGTNVTGLNLTIGDRTYSPSEV
GYFALDYPAGSSGVVGAYKATSWDDARSVSTNTDDFMLQADFANPQNFAGFTYSVAALNDIFDSTNVSISVSAVPEPDIY
AMLASGLGMLVVAVRRKRRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18983; Mature: 18983

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSFWAAASAVGLVVLGSLFVQTAQAAAQVYTFTASNFTSYNGTPVPYAAISGHVTLDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEECEEEECC
TNVTGLNLTIGDRTYSPSEVGYFALDYPAGSSGVVGAYKATSWDDARSVSTNTDDFMLQA
CCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
DFANPQNFAGFTYSVAALNDIFDSTNVSISVSAVPEPDIYAMLASGLGMLVVAVRRKRRE
CCCCCCCCCCEEEEHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNSFWAAASAVGLVVLGSLFVQTAQAAAQVYTFTASNFTSYNGTPVPYAAISGHVTLDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEECEEEECC
TNVTGLNLTIGDRTYSPSEVGYFALDYPAGSSGVVGAYKATSWDDARSVSTNTDDFMLQA
CCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
DFANPQNFAGFTYSVAALNDIFDSTNVSISVSAVPEPDIYAMLASGLGMLVVAVRRKRRE
CCCCCCCCCCEEEEHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA