| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317981
Identifier: 74317981
GI number: 74317981
Start: 2055661
End: 2056092
Strand: Reverse
Name: 74317981
Synonym: Tbd_1963
Alternate gene names: NA
Gene position: 2056092-2055661 (Counterclockwise)
Preceding gene: 74317982
Following gene: 74317980
Centisome position: 70.66
GC content: 45.37
Gene sequence:
>432_bases TTGCCAGCTAACTATGTCGACGCAAGACCTGAGAGCGACAAGCTTACCCATAAGACGGAACACAGTATTTATTATGCTGA TGATCATATTTCCCCCAGCCCGGCGGCTCTGTTTCTTCACAGGCTGTATCAAAAATTAGGGCCTGAGATCGGAACCAAGC AAGTAACATTAACCCGTGCGGATACTGTGGTAACAACACCGGAGCTTCCTCCAAATAGCGGGCTGCTCGGATATTTTGTT GTGGAAAAGTATGTGCGTGTAGATATTGCGGGAAAGATTGGTGAGAAAGATTTTTCGTATGGGACATACCGTAGTTTCCA TGCCGGTCCAAGCGATGGAGATATACGTATGACGATCAACGCTTCAATAGATCAGGCGATTGCGTCAATAGAAACAAAAA AACTGGTGACAACTAGGAAAGACACCAAATGA
Upstream 100 bases:
>100_bases AACAACCCTATCACTCGTCACTTTCATCCTGATTCTTTTTACGAGTGGGTGTGGCGGAGTATCGAATATACAAATCCAAG GAACGGGAAATAGCATTCCG
Downstream 100 bases:
>100_bases ATTAAAGGGGCCACCCATCAGCCGGCCGTCGTCAAACGCGAATAGCTTACCGCCCGCCACCATTGATGGCGGGTTTTTTA CATCCGACCCTGCTTTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPANYVDARPESDKLTHKTEHSIYYADDHISPSPAALFLHRLYQKLGPEIGTKQVTLTRADTVVTTPELPPNSGLLGYFV VEKYVRVDIAGKIGEKDFSYGTYRSFHAGPSDGDIRMTINASIDQAIASIETKKLVTTRKDTK
Sequences:
>Translated_143_residues MPANYVDARPESDKLTHKTEHSIYYADDHISPSPAALFLHRLYQKLGPEIGTKQVTLTRADTVVTTPELPPNSGLLGYFV VEKYVRVDIAGKIGEKDFSYGTYRSFHAGPSDGDIRMTINASIDQAIASIETKKLVTTRKDTK >Mature_142_residues PANYVDARPESDKLTHKTEHSIYYADDHISPSPAALFLHRLYQKLGPEIGTKQVTLTRADTVVTTPELPPNSGLLGYFVV EKYVRVDIAGKIGEKDFSYGTYRSFHAGPSDGDIRMTINASIDQAIASIETKKLVTTRKDTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15871; Mature: 15740
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANYVDARPESDKLTHKTEHSIYYADDHISPSPAALFLHRLYQKLGPEIGTKQVTLTRA CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC DTVVTTPELPPNSGLLGYFVVEKYVRVDIAGKIGEKDFSYGTYRSFHAGPSDGDIRMTIN CEEEECCCCCCCCCEEHHHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEE ASIDQAIASIETKKLVTTRKDTK CCHHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure PANYVDARPESDKLTHKTEHSIYYADDHISPSPAALFLHRLYQKLGPEIGTKQVTLTRA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC DTVVTTPELPPNSGLLGYFVVEKYVRVDIAGKIGEKDFSYGTYRSFHAGPSDGDIRMTIN CEEEECCCCCCCCCEEHHHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEE ASIDQAIASIETKKLVTTRKDTK CCHHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA