| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317968
Identifier: 74317968
GI number: 74317968
Start: 2044331
End: 2044741
Strand: Reverse
Name: 74317968
Synonym: Tbd_1950
Alternate gene names: NA
Gene position: 2044741-2044331 (Counterclockwise)
Preceding gene: 74317969
Following gene: 74317966
Centisome position: 70.27
GC content: 70.32
Gene sequence:
>411_bases ATGAGCCGCAACACGATTCGTATCCGCGCGTCCTTTTCCTTCAAGGGCGAGGCCTGCGAGCCCGAAGCGCGCATCGACCT CGACGCCTGCCTGGGCGAGCCGGGTGTCGCGCCCGACTTTTATCGGCGTCTCGCCCGCGCGGCCGGGATCGACCCCGGCT CCTACCTCTACGAAGTCTTCGAGTCGCACCCGCTTTCGTTCTCGGATGCGACGGGCGTCGCGGCGCGACATTGCGGCGAC GGCGACTTCGACTGGAGGCGCTTCGAGCAGGACGCGCGCGACGCGCGGGACTGGCACGTCGCGCGTCGCGTCGCCGAGTC GGTCATCGGCGCGCGCGACTGGGAGGCGGACGCGACGCTGAAGGCGGCGCTGCTCGCCGTCTTCCGCGCAGGAAAATCGC CTGCGGCGTAG
Upstream 100 bases:
>100_bases CGGCGTCCGCTCCCCAGCGCGGAAACGCCGGCTGCGTCGCCGAAGGCGGCGGCTTCGATCGGCTTCCCCGGCTGACCCCG GTTTTCGTCGAGCCCGCGCC
Downstream 100 bases:
>100_bases GTCGGCCTCGCCGCGTCAGCTCTCCGAAGTGAGTTTGTCGTCGAGCGATTTCGCGAGTTCGCTGACGTCGGTCGCGGTCG CCAGTTCGCGCTCCTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSRNTIRIRASFSFKGEACEPEARIDLDACLGEPGVAPDFYRRLARAAGIDPGSYLYEVFESHPLSFSDATGVAARHCGD GDFDWRRFEQDARDARDWHVARRVAESVIGARDWEADATLKAALLAVFRAGKSPAA
Sequences:
>Translated_136_residues MSRNTIRIRASFSFKGEACEPEARIDLDACLGEPGVAPDFYRRLARAAGIDPGSYLYEVFESHPLSFSDATGVAARHCGD GDFDWRRFEQDARDARDWHVARRVAESVIGARDWEADATLKAALLAVFRAGKSPAA >Mature_135_residues SRNTIRIRASFSFKGEACEPEARIDLDACLGEPGVAPDFYRRLARAAGIDPGSYLYEVFESHPLSFSDATGVAARHCGDG DFDWRRFEQDARDARDWHVARRVAESVIGARDWEADATLKAALLAVFRAGKSPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14991; Mature: 14860
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNTIRIRASFSFKGEACEPEARIDLDACLGEPGVAPDFYRRLARAAGIDPGSYLYEVF CCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH ESHPLSFSDATGVAARHCGDGDFDWRRFEQDARDARDWHVARRVAESVIGARDWEADATL HCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH KAALLAVFRAGKSPAA HHHHHHHHHCCCCCCC >Mature Secondary Structure SRNTIRIRASFSFKGEACEPEARIDLDACLGEPGVAPDFYRRLARAAGIDPGSYLYEVF CCCEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH ESHPLSFSDATGVAARHCGDGDFDWRRFEQDARDARDWHVARRVAESVIGARDWEADATL HCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH KAALLAVFRAGKSPAA HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA