| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is hmp [C]
Identifier: 74317966
GI number: 74317966
Start: 2042950
End: 2043615
Strand: Reverse
Name: hmp [C]
Synonym: Tbd_1948
Alternate gene names: 74317966
Gene position: 2043615-2042950 (Counterclockwise)
Preceding gene: 74317968
Following gene: 74317962
Centisome position: 70.23
GC content: 65.02
Gene sequence:
>666_bases ATGGACCACGCCGTCAAGCTTCTCATGACCCAGTTCGTCACCCATGACGTGAAGCGCTTCATCGTCAGCAAGCCGCCGGG GTTTTCCGTCATGCCGGGCCAGGGCGTCGAACTCGCGATCGATCGACCCGGCCTGCGCGAGCAGCGCCGGCCTTTCACGC CGACCGGGCTCGCGGCGGACGCGGTGCTCGAATTCACGATCAAGGGCTACCCAAGCCACGCCGGCGTGACCGACGCGCTG CACCGGCTGGAACCCGGTGCGGAAATGCTGATGTCGGAGCCTTTCGGCACGATCCAGTACAAGGGGCCGGGCGTGTTCGT CGCGGGCGGCGCCGGCATTACGCCTTTTCTCGCGATCCTGCGCGAACGTGCGCACCGGGGCGAGCTCGCCGGTCAGACCC TGATCTTCTCGAACAAGACGCCGGGCGACGTGATCTGCGAAAAGGAATTGCGGCATCTGCTAGGCGAGCGCTGCCTCCTG CTGACGACCGCGGCGGATGCACCGGGGTACGCGCATCGGCGCATCGATCGCGCTTTTCTCGAAGAAACGATTGACGACTT CACGCAGAATTTCTATGTCTGCGGACCGCCGCCTTTCATGGAAGCCGTCAACGGCGCGCTGACCGATCTCGGCGCGCGGG CGGAGAGCCTGGTGTTCGAACAGTAA
Upstream 100 bases:
>100_bases CAACCCATTCCCGCGTAGGAATCCTGGCGATGTCCCGCCGGGGCCGTCCGGGGGGCGGGCCCATGTCTAAGCTGAAAGCA TCCCCATCCGGAGCCGAACC
Downstream 100 bases:
>100_bases TGCCTCGGCGGACCCGGAACGAATCCCGGGTTCGCGAGGGGGCCGAGCGTCGTCGGCCAGAGGAAGGGAGGGCGGCCCGG CCGCGGAAGGGCCGGGAACG
Product: putative flavodoxin reductase
Products: @TETR01txt*tetrahydropteridine!; NO3-; NAD(P); Proton [C]
Alternate protein names: Oxidoreductase; CDP-6-Deoxy-Delta-3 4-Glucoseen Reductase; Ferredoxin; Flavodoxin Reductase Family; Oxidoreductase FAD/NAD
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MDHAVKLLMTQFVTHDVKRFIVSKPPGFSVMPGQGVELAIDRPGLREQRRPFTPTGLAADAVLEFTIKGYPSHAGVTDAL HRLEPGAEMLMSEPFGTIQYKGPGVFVAGGAGITPFLAILRERAHRGELAGQTLIFSNKTPGDVICEKELRHLLGERCLL LTTAADAPGYAHRRIDRAFLEETIDDFTQNFYVCGPPPFMEAVNGALTDLGARAESLVFEQ
Sequences:
>Translated_221_residues MDHAVKLLMTQFVTHDVKRFIVSKPPGFSVMPGQGVELAIDRPGLREQRRPFTPTGLAADAVLEFTIKGYPSHAGVTDAL HRLEPGAEMLMSEPFGTIQYKGPGVFVAGGAGITPFLAILRERAHRGELAGQTLIFSNKTPGDVICEKELRHLLGERCLL LTTAADAPGYAHRRIDRAFLEETIDDFTQNFYVCGPPPFMEAVNGALTDLGARAESLVFEQ >Mature_221_residues MDHAVKLLMTQFVTHDVKRFIVSKPPGFSVMPGQGVELAIDRPGLREQRRPFTPTGLAADAVLEFTIKGYPSHAGVTDAL HRLEPGAEMLMSEPFGTIQYKGPGVFVAGGAGITPFLAILRERAHRGELAGQTLIFSNKTPGDVICEKELRHLLGERCLL LTTAADAPGYAHRRIDRAFLEETIDDFTQNFYVCGPPPFMEAVNGALTDLGARAESLVFEQ
Specific function: Possesses Dihydropteridine Reductase Activity. Also Has Nitric Oxide Dioxygenase Activity. Seems To Reduces The Complexed Fe(3+) Iron Of Siderophores To Fe(2+), Thus Releasing It From The Chelator. [C]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.5.1.34 [C]
Molecular weight: Translated: 24133; Mature: 24133
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHAVKLLMTQFVTHDVKRFIVSKPPGFSVMPGQGVELAIDRPGLREQRRPFTPTGLAAD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCHHHH AVLEFTIKGYPSHAGVTDALHRLEPGAEMLMSEPFGTIQYKGPGVFVAGGAGITPFLAIL HHHEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCCEEEECCCEEEEECCCCHHHHHHHH RERAHRGELAGQTLIFSNKTPGDVICEKELRHLLGERCLLLTTAADAPGYAHRRIDRAFL HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH EETIDDFTQNFYVCGPPPFMEAVNGALTDLGARAESLVFEQ HHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDHAVKLLMTQFVTHDVKRFIVSKPPGFSVMPGQGVELAIDRPGLREQRRPFTPTGLAAD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCHHHH AVLEFTIKGYPSHAGVTDALHRLEPGAEMLMSEPFGTIQYKGPGVFVAGGAGITPFLAIL HHHEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCCEEEECCCEEEEECCCCHHHHHHHH RERAHRGELAGQTLIFSNKTPGDVICEKELRHLLGERCLLLTTAADAPGYAHRRIDRAFL HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH EETIDDFTQNFYVCGPPPFMEAVNGALTDLGARAESLVFEQ HHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FAD [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dihydropteridine; 2 nitric oxide; O2; NAD(P)H [C]
Specific reaction: NAD(P)H + dihydropteridine = NAD(P)+ @TETR01.txt*tetrahydropteridine! 2 nitric oxide + 2 O2 + NAD(P)H = 2 NO3- + NAD(P) + Proton [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA