| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317964
Identifier: 74317964
GI number: 74317964
Start: 2041371
End: 2041811
Strand: Direct
Name: 74317964
Synonym: Tbd_1946
Alternate gene names: NA
Gene position: 2041371-2041811 (Clockwise)
Preceding gene: 74317963
Following gene: 74317965
Centisome position: 70.15
GC content: 65.53
Gene sequence:
>441_bases TTGCGTACACCCATCGACCTGTCCCTGTCCCGACTCCCCCGCGCGCGCCGGGCCCTCGCCGTCCTGCTGCTCGCGGTCGG CACTGCCGGCTGCGATCCGATCTCGCTGACCGCCGCGTCGCTCGGCGCCGGCGTCGGCGTTTCGCACACGCTCAACGGCA TCATCTACCGGACGTTCACCGCGCCCATGAAGACCGTGGAAAACGGCAGCGTGCAGGCGATGCGCGACATGGGCGTCAAA GTCGTCTCGCGCTCGACCAACCAGGAGGGCGAGCGCGTGATCAACGCCACGGCGAGGGACCGCGAGATCGAGGTGCTGCT GGAACCCCTCACCAAGCGAACCACGCGCATGCGTGTCATTGCCAGTAACGGCCTGCTGAAGGACAGTGCCACCGCGCAGG AAATCATGCTTCAAACTGAACGGGTTCTTTCCAAGGGATAA
Upstream 100 bases:
>100_bases ACGGTAAACGGCGCGTGCGCCCGGCGGGCGCTCCCGTCTGCGGCCGCGCGATCGATACCAACAAGGCTGCTCTTTGCACC GGATTTTGAGGCGACCCAGC
Downstream 100 bases:
>100_bases CAGAGAGGAGACAGACCATGCAGCCCATCGCCACCCCGCACCTGCAGTCGATACTGCTTGCCTGCGCGATCGCCGTAGCC TTCCCCGCCGTTGCGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRTPIDLSLSRLPRARRALAVLLLAVGTAGCDPISLTAASLGAGVGVSHTLNGIIYRTFTAPMKTVENGSVQAMRDMGVK VVSRSTNQEGERVINATARDREIEVLLEPLTKRTTRMRVIASNGLLKDSATAQEIMLQTERVLSKG
Sequences:
>Translated_146_residues MRTPIDLSLSRLPRARRALAVLLLAVGTAGCDPISLTAASLGAGVGVSHTLNGIIYRTFTAPMKTVENGSVQAMRDMGVK VVSRSTNQEGERVINATARDREIEVLLEPLTKRTTRMRVIASNGLLKDSATAQEIMLQTERVLSKG >Mature_146_residues MRTPIDLSLSRLPRARRALAVLLLAVGTAGCDPISLTAASLGAGVGVSHTLNGIIYRTFTAPMKTVENGSVQAMRDMGVK VVSRSTNQEGERVINATARDREIEVLLEPLTKRTTRMRVIASNGLLKDSATAQEIMLQTERVLSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15702; Mature: 15702
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPIDLSLSRLPRARRALAVLLLAVGTAGCDPISLTAASLGAGVGVSHTLNGIIYRTFT CCCCCCCCHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEEEEH APMKTVENGSVQAMRDMGVKVVSRSTNQEGERVINATARDREIEVLLEPLTKRTTRMRVI HHHHHHCCCCHHHHHHCCHHEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEE ASNGLLKDSATAQEIMLQTERVLSKG ECCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTPIDLSLSRLPRARRALAVLLLAVGTAGCDPISLTAASLGAGVGVSHTLNGIIYRTFT CCCCCCCCHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEEEEH APMKTVENGSVQAMRDMGVKVVSRSTNQEGERVINATARDREIEVLLEPLTKRTTRMRVI HHHHHHCCCCHHHHHHCCHHEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEE ASNGLLKDSATAQEIMLQTERVLSKG ECCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA