Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317936

Identifier: 74317936

GI number: 74317936

Start: 2012955

End: 2015441

Strand: Reverse

Name: 74317936

Synonym: Tbd_1918

Alternate gene names: NA

Gene position: 2015441-2012955 (Counterclockwise)

Preceding gene: 74317937

Following gene: 74317935

Centisome position: 69.26

GC content: 69.24

Gene sequence:

>2487_bases
ATGAAATTGAAGCGCTTCACCACCCAGCTGGCCGCCGCCGGGCTTGTCGCCCTGCCGTTGATGGCGCACGCCGCCGGGTT
GGGCAAGCTCTCGGTCACCTCGGCGCTCGGTCAGCCTCTGGCAGCCGAGATCGAGCTGTTCGCCGCCGACAAGGCCGAGC
TCGACAGCATCTCCGCCACCCTTGCATCGGATCAGGCTTACCGCGATGCACGCGTCGATTTCTCCCCGGTGTTGTCGACA
CTGCGTTTCTCGGTCGAGAAGAAGCCCGGCGGCAAGGCCGTGCTCAAAGTCACGTCGAGCCGACCGGTCAACGACCCGTT
CATCGACATGCTGGTCGAACTGAGCTGGGCGTCCGGCCGTCTGGTGCGCGAATACACGATGCTCCTCGACCCGCCCGGCA
TGGCGAGCCCGCAGACCGTCGCGCCCGTGGCTGTCACGCCGGCCCAATCTCCGGCGCGCGCGGCCCCGGCTCCGGTCGCG
CCGCCCGCTGCGCAACCGCCCGCCGCGGCTGACGCCCCCGTTTCCGAGCCGCCGGCGGCGACGGCCACCGCGACGCCCGC
ACCGAAGTCGACGGCACCGCAGGACACCGCACCCACGCGCGTCAAGGTCAAGCGCGGCGACACACTGATCGGCATCGCCC
AGCGCGTGCGCCCCGACAGCGTCAGCCTCGAACAGACGCTCGTCGGCCTCTATCGCGAGAACACGCACGCTTTCGTCGGC
AACATGAACCGCCTCAAGGCGGGCCGCACCTTGGCCGTACCGACGGCAGAGGCCGTTGCGGCGATTCCGCAGAAAGAAGC
AGTGCGTGAACTCAAGCTGCAGGCTGCCGACTGGAACGCCTACCGTCAGAAACTCGCGGCTTCCGTGAGCGGAACCGCCC
CGACCGAGCCCGCGGCAGGTCAGGCGAGCAGCGGCAAGGTCACGTCCAAAGTCGAAGACAAGGCGGCGGCCGCGGCGGCA
GACAAGAAAGACGTGCTCAAGCTGTCCAAGGTCGCGCCGGCCGATAGCGCTGCGAACAAGGGCGAGGCCAGTGCGCTGCA
GGAGAAGCTCCGCGCCCAGGAAGAGGACGCGATCGCGCGACAGAAGGCGCTCGCAGAATCCGACCAGCGCGTCGCGCTGC
TGGAAAAGCAGATTCAGGACATGCAGAAGCTGGCCGACATGAAAGCGCAGGCCCAAGCACCGGCCGAGCCCGAGCCGAGC
GCCGCGTCCGCCGCTACCCCTGAGCCGGCCGCTGCGCCCGCAGAGCCGGCGAAGCCAGCGCCGGTTGCTCCTGCCGTCGC
CGCGCCACCCGCGGCACCGGCGTCCGCCGAAAACTGGTTCGAGCCGCTGCTCGCCAACCCGCTTTACTGGGGCGGTAGCC
TCGCCGCGGTGGGCCTGGGTGGCGTCCTGTGGTGGATGATGGCCGGCGGACGGCGGCGCAAGACCGGCACGACGGGGCTC
GAAGACAGCCTCATCACCGGCGGCGACGTGCGGCCCGACACCGTGCTCGGTTCTGCCGCGGGCGGCAGCGTCAATACCGG
TGACACCTCCTTCCTCACCGACTTCAGCCAGGCCGGGCTCGGCACGATCGACACCCACGACGTCGACCCGATCGCCGAAG
CCGAGGTCTACATGGCGTACGGCCGTGACGCGCAGGCCGAGGAAATCCTCAAGGAAGCGATCGCCAAGAACCCCGATCGC
CACGAGGTGCGGGTGAAACTGCTCGAAATCTATGCCGCGCGCCGCAATACCGCCGCGTTCGAGGCAGCCGCGGGCGAGCT
CTACGCGGCGCTCGGCAGCAAGTCCAGCCCGCTCTGGGACAAGGCCTGCGAGATGGGACGCGGGATCGACCCGACTAACC
CTCTGTACGGGGGTGTCCAGTCGAGCGCGGCGCCTGCAGCCGCCGCGGCGACATTCGCTGCGACGCCGGCGGTCGCCGGC
GGGGCGGTGGGCTTCGATACCGAGCGCGTCGTCGATGCGGGAAATGCAATCTCCGCGGAAACGGCGCACTCCACCGCGGT
GGAGACCGAGCGCCCGCAGGCCGTCGACGCGGCCGTGGCGGCCGTGGCAAGTCCGGTGCTCGACTTCGAGTCGGCCGGGC
AGGCGCCCGCATTCGAGCGCCGCGCGGGGGGCGGCGGCGCCGCGGTTACGGCGGACGCTGACGAGACCGCGGCGGACGAC
GGCCTCCTCGACCTCGAGGGGCTGAGCTTCGATCTGCCCGCGCTGGATACGTCCGCATCGACGGATGACACGCTCAACGT
CGGCCTCGGTCTCGAAGACGACAAGCCGGCCGACGGTAAATTCGATTTCAGCGGCCTCGATCTCGATCTCGGCGATGGCA
GCAACGACGTCGAGCTCGACGAAGTCGGCACCAAGCTCGACCTCGCACGCGCCTATGTGGAAATGGGCGACAAGGAAGGG
GCGCGCGAAATCCTCAACGAAGTGGTGACCGAAGGCAACGACAGCCAGAAGGCCGACGCGAAAGGCATGCTGGGCGCACT
TGGCTAA

Upstream 100 bases:

>100_bases
AGGCGCGGTGTCCGCTAAAGATTGGGCGTGACGAGCCGTCAATGATGGCGTCAAGCATTCAACAGCCCCGCTCGAGCGGG
GGTGAACAGGAGAGAAACGG

Downstream 100 bases:

>100_bases
GTCGTTTCATCCCGTCGCCCGCATCCTTCTCTGGTGCGGGTGGGCGGTTGCGGTGGAGCACGCCGCAACCTCCGTGCTGG
CACTCATGGCCGTCGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: FimV Protein; Tfp Pilus Assembly Protein FimV-Like Protein; FimV N-Terminal Domain Protein; LysM Domain Protein; Type 4 Pilus Biogenesis; LysM Domain-Containing Protein; Motility Protein FimV; Lysm Domain; Transmembrane Tfp Pilus Assembly FimV Protein; TPR Repeat-Containing Protein; FimV C-Terminal Domain-Containing Protein; Protein Containing Tetratricopeptide Repeats; Tfp Pilus Assembly Protein FimV; Tfp Pilus Assembly Protein FimV-Like; Transmembrane Tfp Pilus Assembly Protein FimV; FimV N-Terminal Domain; FimV N-Terminal Domain-Containing Protein; FimV Type IV Pilus Assembly Protein

Number of amino acids: Translated: 828; Mature: 828

Protein sequence:

>828_residues
MKLKRFTTQLAAAGLVALPLMAHAAGLGKLSVTSALGQPLAAEIELFAADKAELDSISATLASDQAYRDARVDFSPVLST
LRFSVEKKPGGKAVLKVTSSRPVNDPFIDMLVELSWASGRLVREYTMLLDPPGMASPQTVAPVAVTPAQSPARAAPAPVA
PPAAQPPAAADAPVSEPPAATATATPAPKSTAPQDTAPTRVKVKRGDTLIGIAQRVRPDSVSLEQTLVGLYRENTHAFVG
NMNRLKAGRTLAVPTAEAVAAIPQKEAVRELKLQAADWNAYRQKLAASVSGTAPTEPAAGQASSGKVTSKVEDKAAAAAA
DKKDVLKLSKVAPADSAANKGEASALQEKLRAQEEDAIARQKALAESDQRVALLEKQIQDMQKLADMKAQAQAPAEPEPS
AASAATPEPAAAPAEPAKPAPVAPAVAAPPAAPASAENWFEPLLANPLYWGGSLAAVGLGGVLWWMMAGGRRRKTGTTGL
EDSLITGGDVRPDTVLGSAAGGSVNTGDTSFLTDFSQAGLGTIDTHDVDPIAEAEVYMAYGRDAQAEEILKEAIAKNPDR
HEVRVKLLEIYAARRNTAAFEAAAGELYAALGSKSSPLWDKACEMGRGIDPTNPLYGGVQSSAAPAAAAATFAATPAVAG
GAVGFDTERVVDAGNAISAETAHSTAVETERPQAVDAAVAAVASPVLDFESAGQAPAFERRAGGGGAAVTADADETAADD
GLLDLEGLSFDLPALDTSASTDDTLNVGLGLEDDKPADGKFDFSGLDLDLGDGSNDVELDEVGTKLDLARAYVEMGDKEG
AREILNEVVTEGNDSQKADAKGMLGALG

Sequences:

>Translated_828_residues
MKLKRFTTQLAAAGLVALPLMAHAAGLGKLSVTSALGQPLAAEIELFAADKAELDSISATLASDQAYRDARVDFSPVLST
LRFSVEKKPGGKAVLKVTSSRPVNDPFIDMLVELSWASGRLVREYTMLLDPPGMASPQTVAPVAVTPAQSPARAAPAPVA
PPAAQPPAAADAPVSEPPAATATATPAPKSTAPQDTAPTRVKVKRGDTLIGIAQRVRPDSVSLEQTLVGLYRENTHAFVG
NMNRLKAGRTLAVPTAEAVAAIPQKEAVRELKLQAADWNAYRQKLAASVSGTAPTEPAAGQASSGKVTSKVEDKAAAAAA
DKKDVLKLSKVAPADSAANKGEASALQEKLRAQEEDAIARQKALAESDQRVALLEKQIQDMQKLADMKAQAQAPAEPEPS
AASAATPEPAAAPAEPAKPAPVAPAVAAPPAAPASAENWFEPLLANPLYWGGSLAAVGLGGVLWWMMAGGRRRKTGTTGL
EDSLITGGDVRPDTVLGSAAGGSVNTGDTSFLTDFSQAGLGTIDTHDVDPIAEAEVYMAYGRDAQAEEILKEAIAKNPDR
HEVRVKLLEIYAARRNTAAFEAAAGELYAALGSKSSPLWDKACEMGRGIDPTNPLYGGVQSSAAPAAAAATFAATPAVAG
GAVGFDTERVVDAGNAISAETAHSTAVETERPQAVDAAVAAVASPVLDFESAGQAPAFERRAGGGGAAVTADADETAADD
GLLDLEGLSFDLPALDTSASTDDTLNVGLGLEDDKPADGKFDFSGLDLDLGDGSNDVELDEVGTKLDLARAYVEMGDKEG
AREILNEVVTEGNDSQKADAKGMLGALG
>Mature_828_residues
MKLKRFTTQLAAAGLVALPLMAHAAGLGKLSVTSALGQPLAAEIELFAADKAELDSISATLASDQAYRDARVDFSPVLST
LRFSVEKKPGGKAVLKVTSSRPVNDPFIDMLVELSWASGRLVREYTMLLDPPGMASPQTVAPVAVTPAQSPARAAPAPVA
PPAAQPPAAADAPVSEPPAATATATPAPKSTAPQDTAPTRVKVKRGDTLIGIAQRVRPDSVSLEQTLVGLYRENTHAFVG
NMNRLKAGRTLAVPTAEAVAAIPQKEAVRELKLQAADWNAYRQKLAASVSGTAPTEPAAGQASSGKVTSKVEDKAAAAAA
DKKDVLKLSKVAPADSAANKGEASALQEKLRAQEEDAIARQKALAESDQRVALLEKQIQDMQKLADMKAQAQAPAEPEPS
AASAATPEPAAAPAEPAKPAPVAPAVAAPPAAPASAENWFEPLLANPLYWGGSLAAVGLGGVLWWMMAGGRRRKTGTTGL
EDSLITGGDVRPDTVLGSAAGGSVNTGDTSFLTDFSQAGLGTIDTHDVDPIAEAEVYMAYGRDAQAEEILKEAIAKNPDR
HEVRVKLLEIYAARRNTAAFEAAAGELYAALGSKSSPLWDKACEMGRGIDPTNPLYGGVQSSAAPAAAAATFAATPAVAG
GAVGFDTERVVDAGNAISAETAHSTAVETERPQAVDAAVAAVASPVLDFESAGQAPAFERRAGGGGAAVTADADETAADD
GLLDLEGLSFDLPALDTSASTDDTLNVGLGLEDDKPADGKFDFSGLDLDLGDGSNDVELDEVGTKLDLARAYVEMGDKEG
AREILNEVVTEGNDSQKADAKGMLGALG

Specific function: Unknown

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84963; Mature: 84963

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRFTTQLAAAGLVALPLMAHAAGLGKLSVTSALGQPLAAEIELFAADKAELDSISAT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHEEEEECCHHHHHHHHHH
LASDQAYRDARVDFSPVLSTLRFSVEKKPGGKAVLKVTSSRPVNDPFIDMLVELSWASGR
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCH
LVREYTMLLDPPGMASPQTVAPVAVTPAQSPARAAPAPVAPPAAQPPAAADAPVSEPPAA
HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TATATPAPKSTAPQDTAPTRVKVKRGDTLIGIAQRVRPDSVSLEQTLVGLYRENTHAFVG
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHCCCCCCCHHHHHHHHHHCCCHHHHC
NMNRLKAGRTLAVPTAEAVAAIPQKEAVRELKLQAADWNAYRQKLAASVSGTAPTEPAAG
CHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
QASSGKVTSKVEDKAAAAAADKKDVLKLSKVAPADSAANKGEASALQEKLRAQEEDAIAR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QKALAESDQRVALLEKQIQDMQKLADMKAQAQAPAEPEPSAASAATPEPAAAPAEPAKPA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVAPAVAAPPAAPASAENWFEPLLANPLYWGGSLAAVGLGGVLWWMMAGGRRRKTGTTGL
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
EDSLITGGDVRPDTVLGSAAGGSVNTGDTSFLTDFSQAGLGTIDTHDVDPIAEAEVYMAY
CCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
GRDAQAEEILKEAIAKNPDRHEVRVKLLEIYAARRNTAAFEAAAGELYAALGSKSSPLWD
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH
KACEMGRGIDPTNPLYGGVQSSAAPAAAAATFAATPAVAGGAVGFDTERVVDAGNAISAE
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC
TAHSTAVETERPQAVDAAVAAVASPVLDFESAGQAPAFERRAGGGGAAVTADADETAADD
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCCCCCCC
GLLDLEGLSFDLPALDTSASTDDTLNVGLGLEDDKPADGKFDFSGLDLDLGDGSNDVELD
CCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHH
EVGTKLDLARAYVEMGDKEGAREILNEVVTEGNDSQKADAKGMLGALG
HHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCHHHCCC
>Mature Secondary Structure
MKLKRFTTQLAAAGLVALPLMAHAAGLGKLSVTSALGQPLAAEIELFAADKAELDSISAT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHEEEEECCHHHHHHHHHH
LASDQAYRDARVDFSPVLSTLRFSVEKKPGGKAVLKVTSSRPVNDPFIDMLVELSWASGR
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCH
LVREYTMLLDPPGMASPQTVAPVAVTPAQSPARAAPAPVAPPAAQPPAAADAPVSEPPAA
HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TATATPAPKSTAPQDTAPTRVKVKRGDTLIGIAQRVRPDSVSLEQTLVGLYRENTHAFVG
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHCCCCCCCHHHHHHHHHHCCCHHHHC
NMNRLKAGRTLAVPTAEAVAAIPQKEAVRELKLQAADWNAYRQKLAASVSGTAPTEPAAG
CHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
QASSGKVTSKVEDKAAAAAADKKDVLKLSKVAPADSAANKGEASALQEKLRAQEEDAIAR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QKALAESDQRVALLEKQIQDMQKLADMKAQAQAPAEPEPSAASAATPEPAAAPAEPAKPA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVAPAVAAPPAAPASAENWFEPLLANPLYWGGSLAAVGLGGVLWWMMAGGRRRKTGTTGL
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
EDSLITGGDVRPDTVLGSAAGGSVNTGDTSFLTDFSQAGLGTIDTHDVDPIAEAEVYMAY
CCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
GRDAQAEEILKEAIAKNPDRHEVRVKLLEIYAARRNTAAFEAAAGELYAALGSKSSPLWD
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH
KACEMGRGIDPTNPLYGGVQSSAAPAAAAATFAATPAVAGGAVGFDTERVVDAGNAISAE
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC
TAHSTAVETERPQAVDAAVAAVASPVLDFESAGQAPAFERRAGGGGAAVTADADETAADD
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCCCCCCC
GLLDLEGLSFDLPALDTSASTDDTLNVGLGLEDDKPADGKFDFSGLDLDLGDGSNDVELD
CCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHH
EVGTKLDLARAYVEMGDKEGAREILNEVVTEGNDSQKADAKGMLGALG
HHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA