| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mlaE [H]
Identifier: 74317917
GI number: 74317917
Start: 1996116
End: 1996904
Strand: Reverse
Name: mlaE [H]
Synonym: Tbd_1899
Alternate gene names: 74317917
Gene position: 1996904-1996116 (Counterclockwise)
Preceding gene: 74317918
Following gene: 74317916
Centisome position: 68.63
GC content: 66.29
Gene sequence:
>789_bases ATGCTTAGGCAGGCCATCGAAAACCTCGGCGCCCGCACGATAGACGCGGTCTGGCGCATCGGCTTCGCGACCCGTTTCTT CGCCGCGACGCTGCTGCATTCGGGCACCGCGTTCCGCCGTTTCGGCCTGACCGTGCGTGAGCTCTATTTCACCGGCGTGC TGTCGCTCATCATCATCCTGGTGTCGGGCCTCTTCGTCGGCATGGTGCTCGGGCTGCAAGGCTACGAGACCTTGCAGACC TACGGCTCGGAGGAAGCGCTCGGCATCCTGGTCGCGCTGTCGCTGGTGCGCGAACTCGGCCCGGTCGTCGCGGCCTTGCT GTTCGCCAGCCGCGCCGGCAGCGCGATCACGGCCGAGATCGGCCTCATGAAGGCGACCGAACAGCTTTCGGCGATGGAAA TGATGGCCGTCGACCCGATCGCCCGCGTCGTCGCGCCGCGCTTCTGGGCAGGCGTGATCTCGATGCCGCTCCTGGCGGCA CTGTTCTCGGCCATGGGGGTGTTCGGCGGCTACCTCGTCGGCGTGCAGCTGATCGGGGTCGACGAGGGCGCGTTCTGGTC GCAGATGCAAAGTGCGGTGGATTTCGAGCAGGACATCCTGAACGGCGTCATCAAGAGCGTCGTCTTCGGCGTCGCGATCA CCGCGATCGCGCTGTTCGAGGGCTACGACGCGCCGCCGACCGCCGAGGGGGTGTCGCGGGCGACGACCCGTACCGTGGTG ACCTCGAGCCTCGCGGTGCTCGCGCTCGATTTCGTTTTGACTGCATTCATGTTCCGGGGAAGCAACTGA
Upstream 100 bases:
>100_bases TCCTACGTGCACCAGTTCGTCCACGGCGAAGCGGACGGCCCGGTACCCTTCCACTACCCGGGGCCGGACTACGCCACCGA CCTCCAGTTGGGAGCCATGC
Downstream 100 bases:
>100_bases CAATGAACAAGACCGTACTCGATCTCTGGGTGGGATTATTCGTCATCGCGGGAATCGTGGCCCTGCTGTTCCTCGCGCTC AAGGTCGGCAGCATGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIILVSGLFVGMVLGLQGYETLQT YGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAA LFSAMGVFGGYLVGVQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVV TSSLAVLALDFVLTAFMFRGSN
Sequences:
>Translated_262_residues MLRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIILVSGLFVGMVLGLQGYETLQT YGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAA LFSAMGVFGGYLVGVQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVV TSSLAVLALDFVLTAFMFRGSN >Mature_262_residues MLRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIILVSGLFVGMVLGLQGYETLQT YGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAA LFSAMGVFGGYLVGVQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVV TSSLAVLALDFVLTAFMFRGSN
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=62.4031007751938, Blast_Score=310, Evalue=6e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27859; Mature: 27859
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIIL CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VSGLFVGMVLGLQGYETLQTYGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEI HHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYLVGVQLIGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC DEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TSSLAVLALDFVLTAFMFRGSN HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIIL CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VSGLFVGMVLGLQGYETLQTYGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEI HHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYLVGVQLIGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC DEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TSSLAVLALDFVLTAFMFRGSN HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]