Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317905

Identifier: 74317905

GI number: 74317905

Start: 1985895

End: 1986737

Strand: Reverse

Name: 74317905

Synonym: Tbd_1887

Alternate gene names: NA

Gene position: 1986737-1985895 (Counterclockwise)

Preceding gene: 74317906

Following gene: 74317904

Centisome position: 68.28

GC content: 50.42

Gene sequence:

>843_bases
ATGAATCAGTATGAAAGAAAAATGTTGGATCTTCTCAAGCGAGGTAAGCAGGAACTGGGCTACGTCGGCGTCAAGGCTGA
ATTCGAGGCGGAAGGGACGCGCACGGACGAATTGTTGAGACTGATCGAGCTGGCACGCAAGGCGGGTCTCAACGTCGGCC
TAAAAATCGGAGGCTGCGAGGCGATGCGCGATTTGATGGAAAGCAAGCAATACGGCGTCGAGTACATTATTGCCCCCATG
ATAGAGAGTGGCTATGCCTTGTCCAAATTCATTGATGCAAAAAACAAGGTGTATAGCAAGGATGAACAACGCGATACGCG
ATTTCTCTTTAATGTAGAAACAAAGAGCGCGTTCGGTTGTATGGATGAATTGGTGCAAATAGCTGCTCAACCCGGGGGGG
CGGACGGGGTCGTCTTTGGTCGCGTCGACTTTTCTCTGTCTATGGGACTCACGCGCGATGACATCAATGACCCAAAAGTC
ACCTCCTACTGCCTTGAGGTTTCGGAGGCGTGCAAAAGGAGCGGCTTGGATTTTGTAGTGGGAGGCGGCGTATCGATGGA
TGCGCTCTCGATCATGAAGGAGTTGAATTCGAGTCATCTCTCCCGATTCGAGACGAGAAAAATCATTTTTGATGCAGCGA
TGATGGAGAATGCGGATGTCCATAACGGGCTGCTGCAGGCCGTTCATTTCGAATTGCTTTGGCTGCTGAACAAGCGTGAG
TACTACAGTTGCATTCTGAAAGAGGATGCTAAGCGCATAGAAATGCTTGAGAGACGATGGCACGTGCTTTCGGCCGATGA
GAAGGCGAGCACGTCGACGTATGTAAACCAACCGAACATTTGA

Upstream 100 bases:

>100_bases
ACGTCTCATCGAATAGGCCATACACGTAGGGCTTTGGAAGCTCTGGCAATTAACTTATTTACTGCCTTGCAGGCACTTCG
GATCCGGTTGGAGGAATGTT

Downstream 100 bases:

>100_bases
CTCCGGCCATGGATAAGCCGCGCAAAACGATCTTGCTATTTGGTGCTAGTGGCGCAATCGGATCCTCCATTGCGGACTTA
TTCTTGTCTCGCGACTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNQYERKMLDLLKRGKQELGYVGVKAEFEAEGTRTDELLRLIELARKAGLNVGLKIGGCEAMRDLMESKQYGVEYIIAPM
IESGYALSKFIDAKNKVYSKDEQRDTRFLFNVETKSAFGCMDELVQIAAQPGGADGVVFGRVDFSLSMGLTRDDINDPKV
TSYCLEVSEACKRSGLDFVVGGGVSMDALSIMKELNSSHLSRFETRKIIFDAAMMENADVHNGLLQAVHFELLWLLNKRE
YYSCILKEDAKRIEMLERRWHVLSADEKASTSTYVNQPNI

Sequences:

>Translated_280_residues
MNQYERKMLDLLKRGKQELGYVGVKAEFEAEGTRTDELLRLIELARKAGLNVGLKIGGCEAMRDLMESKQYGVEYIIAPM
IESGYALSKFIDAKNKVYSKDEQRDTRFLFNVETKSAFGCMDELVQIAAQPGGADGVVFGRVDFSLSMGLTRDDINDPKV
TSYCLEVSEACKRSGLDFVVGGGVSMDALSIMKELNSSHLSRFETRKIIFDAAMMENADVHNGLLQAVHFELLWLLNKRE
YYSCILKEDAKRIEMLERRWHVLSADEKASTSTYVNQPNI
>Mature_280_residues
MNQYERKMLDLLKRGKQELGYVGVKAEFEAEGTRTDELLRLIELARKAGLNVGLKIGGCEAMRDLMESKQYGVEYIIAPM
IESGYALSKFIDAKNKVYSKDEQRDTRFLFNVETKSAFGCMDELVQIAAQPGGADGVVFGRVDFSLSMGLTRDDINDPKV
TSYCLEVSEACKRSGLDFVVGGGVSMDALSIMKELNSSHLSRFETRKIIFDAAMMENADVHNGLLQAVHFELLWLLNKRE
YYSCILKEDAKRIEMLERRWHVLSADEKASTSTYVNQPNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31585; Mature: 31585

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQYERKMLDLLKRGKQELGYVGVKAEFEAEGTRTDELLRLIELARKAGLNVGLKIGGCE
CCHHHHHHHHHHHHCHHHHCEECEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHH
AMRDLMESKQYGVEYIIAPMIESGYALSKFIDAKNKVYSKDEQRDTRFLFNVETKSAFGC
HHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHH
MDELVQIAAQPGGADGVVFGRVDFSLSMGLTRDDINDPKVTSYCLEVSEACKRSGLDFVV
HHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
GGGVSMDALSIMKELNSSHLSRFETRKIIFDAAMMENADVHNGLLQAVHFELLWLLNKRE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
YYSCILKEDAKRIEMLERRWHVLSADEKASTSTYVNQPNI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQYERKMLDLLKRGKQELGYVGVKAEFEAEGTRTDELLRLIELARKAGLNVGLKIGGCE
CCHHHHHHHHHHHHCHHHHCEECEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHH
AMRDLMESKQYGVEYIIAPMIESGYALSKFIDAKNKVYSKDEQRDTRFLFNVETKSAFGC
HHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHH
MDELVQIAAQPGGADGVVFGRVDFSLSMGLTRDDINDPKVTSYCLEVSEACKRSGLDFVV
HHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
GGGVSMDALSIMKELNSSHLSRFETRKIIFDAAMMENADVHNGLLQAVHFELLWLLNKRE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
YYSCILKEDAKRIEMLERRWHVLSADEKASTSTYVNQPNI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA