| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ilvB [H]
Identifier: 74317894
GI number: 74317894
Start: 1972718
End: 1974481
Strand: Reverse
Name: ilvB [H]
Synonym: Tbd_1876
Alternate gene names: 74317894
Gene position: 1974481-1972718 (Counterclockwise)
Preceding gene: 74317895
Following gene: 74317893
Centisome position: 67.86
GC content: 55.05
Gene sequence:
>1764_bases ATGCGCTATAGCGATGTAATGGCCGATTGGCTTAAAGATATGGGTTTTACACACTGCTTCTTCGTAGCGGGAGGCAACAT CATGCACATGGTGGCGAGCGCGAGTAAGCGCTTCACATGCATTCCCGTTGTTCATGAAGTCGCAGCAGGCATTGCAACTG AGTACTTCAATGAAAGTAGCCGCACTGAGCGCGCGTTTGCTCTTGTGACTGCCGGGCCCGGGCTCACTAACATTGTTACG GCGATAGGTGGTGCATGGCTCGAGAGTCGCGAGCTACTGGTCATTGGCGGGCAGGTTAAGACTGAGGACCTGAGCCGGAA CACGCTGCGCCAGAAAGGCATACAAGAGATCGCGGGTGTGGATATCGTCCGGCCGATCACGCGTCACGCAATCCTGCTGG ATGATGTTGCGGACCGCCAGACGTTCTCACGGTACGTGCAGGACGGGGCAGAAGGCCGGAAAGGTCCCGTGTTCATCGAG ATTCCACTGGACGTCCAGGGACGCGAAGTTGACCCGGGGAACCTGAGCGGCCCTGAGTCGACCACCACCGAAGCGGCGCT GCCGTGTCTGGATGAATCAGTTTTGCAAGGAATTGTCGAGGAGATCCGTGCTGCCAAACGTCCCATGCTGTTACTAGGTG GTGGCGTGCACCGATCAATCACCGAAACACTCTACGACGGCCTTGCCGACATGGGTGTGCCGATCACCACCACCTGGAAC GGCGCAGATCGCCTCGGCTTTGACCATCCTATGTATTTTGGCCGCCCTAATACGTGGGGGCAACGGTACAGCAACTTGTT GTTGCAGCAATCCGATCTGATCGTCGCCTTGGGCACGCGCTTGGGACTGCAACAAACCGGATTTAACTGGAAGCAATTCG CGCCGAAAGGGCGCGTGGTGCAGGTTGATTGTGATGCCGCAGAATTGACCAAGGGGCATCCGCGAGTCGACATTGCTTTG CTCGCCGATGCAAATACCGTGCTGAAGTCTCTTTCAAACTATGAACTGGGAGACCATTCGGACTGGGGCGAATACTGCCG TGTAGTGCGCGAGAAATTGCCGATCGTAGACCAGAGGAATACAACGAGAGAAGGCTATATCTGTCCCTACGTCTTCGTGC AGCAGCTGTCACGCATGAGTGGTGCGAACGACGTCGTGATCCCGTGTAGCAGCGGTGGCGCTTTTACGGTAATGATGCAA GCATTCGATCAGAAAAGAGGGCAGGTCATCATCACCGACAAGGGATTGGCCTCGATGGGCTATGGACTCAGCGGGGCCAT TGGCGTGGCGTTCGCCCATCCGGATAGGCGGGTGATTCTTGTCGAGGGCGACGGAGGATTTGCCCAGAATTTGCAAGAGT TGGGCACTGTGGCCATAAACAAACTGAATATGAAAATTTTCATTTTCGAAGACGGGGGATACGCCTCCATTCGTATGACT CAGCGCAATTATTTCGGCGGACATTACGTCGGCTGCGACCGTTTGACCGGACTCGGACTTCCCAATTGGGACGCTCTTTT TGCCGCCTACGGGATACCCTGTCTACGCATCGGGCCTGGTTTTGAGGAAAACGGGGATTTCTCTAACCTCTTTAACTCTT TTGGTGTGGCAGCATTTTTGGTGGCGATTGACCCTGAACAGACCTATTTTCCAAAGATCACCAGTCGCGTGACCGACGCC GGGAGTATGGAATCCAACCCACTTCACAGGATGACGCCAGATCTCGATGAAGAACTCTACGAGACGGTAGGCCGCTACCT TTGA
Upstream 100 bases:
>100_bases TTCGCTTGGAGCACGGCAGGCTTTCGGAGGGGGACCAGATGCTGGATCACCCGCAATAGCGCCGTGGGTGGATTGGGTTT TTGATGAATTGGAGAAATGA
Downstream 100 bases:
>100_bases GCCTCTGGACAAGTCGAAGTTGCGTGGCGAAGAGAGCGCTTCGATGGTATCGTTGCCGCCGATCTGCGTGGGGCGGCAAG TCGATTTGGAGTAACGCGAC
Product: acetolactate synthase
Products: NA
Alternate protein names: AHAS-I; Acetohydroxy-acid synthase I large subunit; ALS-I [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MRYSDVMADWLKDMGFTHCFFVAGGNIMHMVASASKRFTCIPVVHEVAAGIATEYFNESSRTERAFALVTAGPGLTNIVT AIGGAWLESRELLVIGGQVKTEDLSRNTLRQKGIQEIAGVDIVRPITRHAILLDDVADRQTFSRYVQDGAEGRKGPVFIE IPLDVQGREVDPGNLSGPESTTTEAALPCLDESVLQGIVEEIRAAKRPMLLLGGGVHRSITETLYDGLADMGVPITTTWN GADRLGFDHPMYFGRPNTWGQRYSNLLLQQSDLIVALGTRLGLQQTGFNWKQFAPKGRVVQVDCDAAELTKGHPRVDIAL LADANTVLKSLSNYELGDHSDWGEYCRVVREKLPIVDQRNTTREGYICPYVFVQQLSRMSGANDVVIPCSSGGAFTVMMQ AFDQKRGQVIITDKGLASMGYGLSGAIGVAFAHPDRRVILVEGDGGFAQNLQELGTVAINKLNMKIFIFEDGGYASIRMT QRNYFGGHYVGCDRLTGLGLPNWDALFAAYGIPCLRIGPGFEENGDFSNLFNSFGVAAFLVAIDPEQTYFPKITSRVTDA GSMESNPLHRMTPDLDEELYETVGRYL
Sequences:
>Translated_587_residues MRYSDVMADWLKDMGFTHCFFVAGGNIMHMVASASKRFTCIPVVHEVAAGIATEYFNESSRTERAFALVTAGPGLTNIVT AIGGAWLESRELLVIGGQVKTEDLSRNTLRQKGIQEIAGVDIVRPITRHAILLDDVADRQTFSRYVQDGAEGRKGPVFIE IPLDVQGREVDPGNLSGPESTTTEAALPCLDESVLQGIVEEIRAAKRPMLLLGGGVHRSITETLYDGLADMGVPITTTWN GADRLGFDHPMYFGRPNTWGQRYSNLLLQQSDLIVALGTRLGLQQTGFNWKQFAPKGRVVQVDCDAAELTKGHPRVDIAL LADANTVLKSLSNYELGDHSDWGEYCRVVREKLPIVDQRNTTREGYICPYVFVQQLSRMSGANDVVIPCSSGGAFTVMMQ AFDQKRGQVIITDKGLASMGYGLSGAIGVAFAHPDRRVILVEGDGGFAQNLQELGTVAINKLNMKIFIFEDGGYASIRMT QRNYFGGHYVGCDRLTGLGLPNWDALFAAYGIPCLRIGPGFEENGDFSNLFNSFGVAAFLVAIDPEQTYFPKITSRVTDA GSMESNPLHRMTPDLDEELYETVGRYL >Mature_587_residues MRYSDVMADWLKDMGFTHCFFVAGGNIMHMVASASKRFTCIPVVHEVAAGIATEYFNESSRTERAFALVTAGPGLTNIVT AIGGAWLESRELLVIGGQVKTEDLSRNTLRQKGIQEIAGVDIVRPITRHAILLDDVADRQTFSRYVQDGAEGRKGPVFIE IPLDVQGREVDPGNLSGPESTTTEAALPCLDESVLQGIVEEIRAAKRPMLLLGGGVHRSITETLYDGLADMGVPITTTWN GADRLGFDHPMYFGRPNTWGQRYSNLLLQQSDLIVALGTRLGLQQTGFNWKQFAPKGRVVQVDCDAAELTKGHPRVDIAL LADANTVLKSLSNYELGDHSDWGEYCRVVREKLPIVDQRNTTREGYICPYVFVQQLSRMSGANDVVIPCSSGGAFTVMMQ AFDQKRGQVIITDKGLASMGYGLSGAIGVAFAHPDRRVILVEGDGGFAQNLQELGTVAINKLNMKIFIFEDGGYASIRMT QRNYFGGHYVGCDRLTGLGLPNWDALFAAYGIPCLRIGPGFEENGDFSNLFNSFGVAAFLVAIDPEQTYFPKITSRVTDA GSMESNPLHRMTPDLDEELYETVGRYL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=537, Percent_Identity=24.3947858472998, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI93004078, Length=509, Percent_Identity=23.9685658153242, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1790104, Length=558, Percent_Identity=28.494623655914, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI87081685, Length=541, Percent_Identity=25.1386321626617, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1786717, Length=506, Percent_Identity=24.5059288537549, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI1787096, Length=499, Percent_Identity=20.6412825651303, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17542570, Length=531, Percent_Identity=25.2354048964218, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17531299, Length=428, Percent_Identity=20.7943925233645, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17531301, Length=434, Percent_Identity=20.7373271889401, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323755, Length=543, Percent_Identity=25.7826887661142, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI19922626, Length=492, Percent_Identity=23.3739837398374, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64337; Mature: 64337
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYSDVMADWLKDMGFTHCFFVAGGNIMHMVASASKRFTCIPVVHEVAAGIATEYFNESS CCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCC RTERAFALVTAGPGLTNIVTAIGGAWLESRELLVIGGQVKTEDLSRNTLRQKGIQEIAGV CCCEEEEEEECCCCHHHHHHHHCCHHCCCCCEEEECCEEECCHHHHHHHHHHHHHHHHCC DIVRPITRHAILLDDVADRQTFSRYVQDGAEGRKGPVFIEIPLDVQGREVDPGNLSGPES HHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC TTTEAALPCLDESVLQGIVEEIRAAKRPMLLLGGGVHRSITETLYDGLADMGVPITTTWN CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECC GADRLGFDHPMYFGRPNTWGQRYSNLLLQQSDLIVALGTRLGLQQTGFNWKQFAPKGRVV CCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCHHHCCCCCCEE QVDCDAAELTKGHPRVDIALLADANTVLKSLSNYELGDHSDWGEYCRVVREKLPIVDQRN EEECCHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC TTREGYICPYVFVQQLSRMSGANDVVIPCSSGGAFTVMMQAFDQKRGQVIITDKGLASMG CCCCCEECHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHHHHCCCEEEEEECCHHHHC YGLSGAIGVAFAHPDRRVILVEGDGGFAQNLQELGTVAINKLNMKIFIFEDGGYASIRMT CCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEEEEEEECCCEEEEEEE QRNYFGGHYVGCDRLTGLGLPNWDALFAAYGIPCLRIGPGFEENGDFSNLFNSFGVAAFL CCCCCCCEEECHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEE VAIDPEQTYFPKITSRVTDAGSMESNPLHRMTPDLDEELYETVGRYL EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRYSDVMADWLKDMGFTHCFFVAGGNIMHMVASASKRFTCIPVVHEVAAGIATEYFNESS CCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCC RTERAFALVTAGPGLTNIVTAIGGAWLESRELLVIGGQVKTEDLSRNTLRQKGIQEIAGV CCCEEEEEEECCCCHHHHHHHHCCHHCCCCCEEEECCEEECCHHHHHHHHHHHHHHHHCC DIVRPITRHAILLDDVADRQTFSRYVQDGAEGRKGPVFIEIPLDVQGREVDPGNLSGPES HHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC TTTEAALPCLDESVLQGIVEEIRAAKRPMLLLGGGVHRSITETLYDGLADMGVPITTTWN CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECC GADRLGFDHPMYFGRPNTWGQRYSNLLLQQSDLIVALGTRLGLQQTGFNWKQFAPKGRVV CCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCHHHCCCCCCEE QVDCDAAELTKGHPRVDIALLADANTVLKSLSNYELGDHSDWGEYCRVVREKLPIVDQRN EEECCHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC TTREGYICPYVFVQQLSRMSGANDVVIPCSSGGAFTVMMQAFDQKRGQVIITDKGLASMG CCCCCEECHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHHHHCCCEEEEEECCHHHHC YGLSGAIGVAFAHPDRRVILVEGDGGFAQNLQELGTVAINKLNMKIFIFEDGGYASIRMT CCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEEEEEEECCCEEEEEEE QRNYFGGHYVGCDRLTGLGLPNWDALFAAYGIPCLRIGPGFEENGDFSNLFNSFGVAAFL CCCCCCCEEECHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEE VAIDPEQTYFPKITSRVTDAGSMESNPLHRMTPDLDEELYETVGRYL EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2989782; 2989781; 7686882; 9278503 [H]