Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317886

Identifier: 74317886

GI number: 74317886

Start: 1963808

End: 1964938

Strand: Direct

Name: 74317886

Synonym: Tbd_1868

Alternate gene names: NA

Gene position: 1963808-1964938 (Clockwise)

Preceding gene: 74317885

Following gene: 74317907

Centisome position: 67.49

GC content: 66.67

Gene sequence:

>1131_bases
ATGTCTGAAGAAAAAAAACTGACCGTACTGCAACTGCTTCCCGCGCTCGAATCCGGGGGCGTCGAGCGCGGGACCGTCGA
AATCGCGCAGGCGCTGGTCGAACACGGCCACCGCGCGCTCGTCATGTCCGCCGGTGGGCGCCTCGTCGCCCCGCTGACGC
AGGCGGGTGCTCTGCATTTCACCTGGCCGATCGGCGTCAAGTCGGTGCGAACGCTCGCGCTCGTCTCGCGCCTGAGAAAA
TTCCTGAGCGAACAAAAGGTCGACGTCGTCCACGCGCGCTCGCGCGTCCCGGCCTGGATCGCTTGGCTCGCCTGGCGCCG
CATGGACCCGTCGACGCGGCCGCGCTTCGTCACGACCGTACACGGTCTCTACGGCGTCAACCGCTACAGCGCGATCATGG
CGCGCGGCGAGCGCGTGATCGCAGTCTCCAACACGGTGCGCGACTACATCCTGCGCGAATATCCCAAGACCCTGCCGTGG
CGCGTCGACGTCATCCACCGCGGCGTCGACGGCGCGCTCTATCCCCATGGCTGGAAACCCGATGCCGGCTGGCACGCTGC
ATTCTTCGGTCAGTTCCCGAATGCGGCGGGCAAGCTGCTGCTCACCCTGCCCGGTCGCATCACGCGCCTCAAGGGACATG
AGTCCTTCATCGAACTCGTCGCCCGGCTGAAGCGCCGCGGACTGCCCGTGCATGGCCTGATCGTCGGCGGCGCGGCAGCG
TCCAAGCAGCGTTATTTGCAGAAGTTGCGCTACCGCGTGCGCAGCATGGGGCTCGAAGCCGACATCAGTTTCACGGGCCA
GCGCGACGACCTGAAAAACATCCTTGCTATGTCGAACCTCGTGCTCTCTCTGTCGACCCAGCCCGAATCCTTCGGCCGCA
CGACGCTCGAAGCGCTGCGGCTCGGCGTGCCGACCGCGGGCTTCGATCACGGCGGCGTAGGGGAAATCCTGCGTACGGTC
TATCCGGCCGGCTTGCTGCCGATGGACCGCATCGACGAGGCCTGCCAGCGCATCGCGCACCTGCTGCAGGAGCCCGACGC
GGTGCCTGAGGGCGACTTCTTTCCGTTGAAGGCGATGATCGAGCGCACGCTCGCGCTCTACGAACAGCTCGCGCGGGCGC
CGCGGCGTTAG

Upstream 100 bases:

>100_bases
TTACCCCGCGTTGCGCCGCAAAACGAACCCGCCGCTGGCCGAGGCCGACCGGTGCGCCGCCTGGATACTCGACTGGCTCG
GCGCCAAGCACTAGGAACCC

Downstream 100 bases:

>100_bases
CTTCGCCCGCGCAGCGCCGCGGGCAGATGCAGCAACCGCCCGCGCAGCTTGCCGTACAGGTCGCGCAAGGCGACGACCGG
GCTCGACAGCCGCAACGCCC

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Lipopolysaccharide Core Biosynthesis Glycosyl Transferase; Glycosyltransferase Protein; Transferase; Phosphatidylinositol Alpha-Mannosyltransferase; N-Acetylgalactosamine Transferase; Group Glycosyltransferase; Lipopolysaccharide Biosynthesis Protein; BshA L-Malic Acid Glycosyltransferase; Alfa-Galactose Transferase

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHFTWPIGVKSVRTLALVSRLRK
FLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTVHGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPW
RVDVIHRGVDGALYPHGWKPDAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA
SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALRLGVPTAGFDHGGVGEILRTV
YPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMIERTLALYEQLARAPRR

Sequences:

>Translated_376_residues
MSEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHFTWPIGVKSVRTLALVSRLRK
FLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTVHGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPW
RVDVIHRGVDGALYPHGWKPDAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA
SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALRLGVPTAGFDHGGVGEILRTV
YPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMIERTLALYEQLARAPRR
>Mature_375_residues
SEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHFTWPIGVKSVRTLALVSRLRKF
LSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTVHGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPWR
VDVIHRGVDGALYPHGWKPDAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAAS
KQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALRLGVPTAGFDHGGVGEILRTVY
PAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMIERTLALYEQLARAPRR

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41813; Mature: 41682

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHF
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECHHCCCCEEE
TWPIGVKSVRTLALVSRLRKFLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEH
HGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPWRVDVIHRGVDGALYPHGWKP
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCC
DAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA
CCCCCHHHHCCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHH
SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALR
HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
LGVPTAGFDHGGVGEILRTVYPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMI
HCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
ERTLALYEQLARAPRR
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHF
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECHHCCCCEEE
TWPIGVKSVRTLALVSRLRKFLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEH
HGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPWRVDVIHRGVDGALYPHGWKP
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCC
DAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA
CCCCCHHHHCCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHH
SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALR
HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH
LGVPTAGFDHGGVGEILRTVYPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMI
HCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
ERTLALYEQLARAPRR
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA