Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317862

Identifier: 74317862

GI number: 74317862

Start: 1940366

End: 1940800

Strand: Reverse

Name: 74317862

Synonym: Tbd_1844

Alternate gene names: NA

Gene position: 1940800-1940366 (Counterclockwise)

Preceding gene: 74317863

Following gene: 74317857

Centisome position: 66.7

GC content: 60.92

Gene sequence:

>435_bases
ATGCAAATCCGCGAGATCCTCACCCTCAAGAGCGACGAAATCTACAGCATCGCCCCGACCGACCGGGTGGAGAGTGCAGT
CGCCCGCATGGTCGAACTCGGCGTCGGCTCACTCGTCGTCCTGAAGGCCGGCGAGATGGTCGGCCTGCTGACCGAGCGCG
ACGTCGTACACGGCATGGTCGAACATGGCTGTGACCTCAAGGACACCGAAGTCAGCGCGATCATGGTCACCGACCCCGTC
GTCGCGAACGCCGACGATTCCGTCGATTACGCGCGCGACGTGATGACGAAGTCACATATCGGCCATCTGCCGATCCTCGA
CGGCAACAAGCTCCTGGCGATCATTTCCTTTCATGATGTCGCGCGCGCCTGCCTCAAGGAAGCGAACTTCGAGAACAGCC
TCCTGAAGCGTTACATCAAGCACTGGCCCGAGTGA

Upstream 100 bases:

>100_bases
CAAGCGCGAGCAGGTCGAAACGGCGCTGGTCAGACCGTAGCCGGCGGCGTCGCCGGATTGTTATCATGAGGGCCTACGCC
CAGCCGATTCGGAGACCAGC

Downstream 100 bases:

>100_bases
GCGCGGGCGGCTAGCGGATCGCGTCGAGGTCGACCGTCCGCTCCATCACCCGCGGCACGATCAGCGCGTAGCCTTGCTGC
TGCCAATGCGCGAGCTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Signal Transduction Protein With CBS Domains; CBS Domain Containing Protein; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; CBS Domain Protein; XRE Family Transcriptional Regulator; Signal Transduction Protein With Cbs Domains; CBS Domain Pair Family; IMP Dehydrogenase; CBS Domain-Containing Signal Transduction Protein; Transcriptional Regulator; Cbs Domain Containing Protein; Signal-Transduction Protein With CBS; Cbs Domain Protein; Transcriptional Regulator XRE Family Protein; CBS Domain Containing Membrane Protein; CBS Domain Pair Family Protein; Inosine-5-Monophosphate Dehydrogenase; Transcriptional Regulator XRE Family; Inosine-5-Monophosphate Dehydrogenase Related Protein; Signal-Transduction Protein With Cbs Domains

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQIREILTLKSDEIYSIAPTDRVESAVARMVELGVGSLVVLKAGEMVGLLTERDVVHGMVEHGCDLKDTEVSAIMVTDPV
VANADDSVDYARDVMTKSHIGHLPILDGNKLLAIISFHDVARACLKEANFENSLLKRYIKHWPE

Sequences:

>Translated_144_residues
MQIREILTLKSDEIYSIAPTDRVESAVARMVELGVGSLVVLKAGEMVGLLTERDVVHGMVEHGCDLKDTEVSAIMVTDPV
VANADDSVDYARDVMTKSHIGHLPILDGNKLLAIISFHDVARACLKEANFENSLLKRYIKHWPE
>Mature_144_residues
MQIREILTLKSDEIYSIAPTDRVESAVARMVELGVGSLVVLKAGEMVGLLTERDVVHGMVEHGCDLKDTEVSAIMVTDPV
VANADDSVDYARDVMTKSHIGHLPILDGNKLLAIISFHDVARACLKEANFENSLLKRYIKHWPE

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15912; Mature: 15912

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIREILTLKSDEIYSIAPTDRVESAVARMVELGVGSLVVLKAGEMVGLLTERDVVHGMV
CCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHH
EHGCDLKDTEVSAIMVTDPVVANADDSVDYARDVMTKSHIGHLPILDGNKLLAIISFHDV
HCCCCCCCCCEEEEEEECCEEECCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEHHHH
ARACLKEANFENSLLKRYIKHWPE
HHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQIREILTLKSDEIYSIAPTDRVESAVARMVELGVGSLVVLKAGEMVGLLTERDVVHGMV
CCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHH
EHGCDLKDTEVSAIMVTDPVVANADDSVDYARDVMTKSHIGHLPILDGNKLLAIISFHDV
HCCCCCCCCCEEEEEEECCEEECCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEHHHH
ARACLKEANFENSLLKRYIKHWPE
HHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA