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The map label for this gene is petB [H]

Identifier: 74317850

GI number: 74317850

Start: 1930989

End: 1932221

Strand: Reverse

Name: petB [H]

Synonym: Tbd_1832

Alternate gene names: 74317850

Gene position: 1932221-1930989 (Counterclockwise)

Preceding gene: 74317851

Following gene: 74317849

Centisome position: 66.4

GC content: 59.94

Gene sequence:

>1233_bases
ATGTCTGCCCTGCAAAAAATGATGGGTTGGATCGACGATCGATTCCCGCTCACCGCCACCTACAAGGCGCACCTGTCCGA
GTACTACGCGCCCAAGAACTTCAACTTCTGGTATTTCTTCGGCTCGCTGGCCCTGCTGGTTCTGGTGCTGCAGATCGTCA
CCGGCATCTTCCTGACGATGAACTACAAGCCGGACGCGGAGCTCGCGTTCGCGTCCGTCGAGTACATCATGCGCGATGTC
GACTGGGGCTGGCTGATCCGCTACATGCATTCGACCGGCGCTTCGATGTTCTTTGTCGTCGTTTACCTCCATATGTTCCG
CGGCCTGATGTACGGTTCCTACCGCAAGCCGCGCGAACTGATCTGGATCTTCGGCGTGCTGATCTATCTGGCGCTGATGG
CGGAAGCCTTCCTCGGCTATCTGCTGCCCTGGGGCCAGATGTCGTTCTGGGGTGCGCAGGTCATCGTCAACCTGTTCGCC
GCCGTGCCCTTCATCGGTGAAGACCTGTCGATCTGGATCCGCGGCGACTACGTGATCTCGGATGCGACGCTGAACCGCTT
CTTCGCCTTCCATGTCATCGCGCTGCCGCTAGTGCTGATCGCGCTGGTCGCCGTGCACCTGGTCGCGCTCCACGAAGTCG
GCTCCAACAACCCGGACGGCATCGAGATCAAGAAGAAGAAGGACGCCAACGGCATTCCGCTCGACGGCATTCCCTTCCAC
CCCTACTACACGGTCAAGGACATCGTCGGCGTCATCGTCTTCCTGATGGTCTTCTCGGCGATCGTGTTCTTCGCGCCGGA
GATGGGCGGCTACTTCCTCGAAGCCAACAACTTCGTTCCCGCCGACCCGCTGAAGACGCCGGAGCACATCGCGCCCTTGT
GGTACTTCACGCCGTTCTACGCGATCCTGCGCGCGGTGCCGCCGCTGTTCGGCTCGCAGTTCCCGGGCGTCGTGGCGATG
GGCATGTCGATCGTGCTGCTGTTCTTCCTACCCTGGCTCGATCGCAGCAAGGTCAAGTCGATCCGCTATCGCGGTCCGAT
CTACAAGATTGCGCTGGCGCTCTTCATCGTTGCCTTCGTTGGCCTGGGCTACCTCGGTCTGCTGCCGGCGACCCCGATCG
CGACGCTCATCGCCCAGGTGTTATCGGTCATCTACTTCCTGTTTTTCCTGTTGATGCCCTGGTATACCTCGATTGACAAA
ACCAAACCGGAACCGGAAAGGGTGACTGGCTAA

Upstream 100 bases:

>100_bases
AAGGGCGTGCCCGCACCGACCAATCTCGTGGTCCCGCCTCATCAATACCTCAGCGACGCCAAGCTGCTGATCGGTGTAGA
CGCAAAAGGAGCCTAAATAA

Downstream 100 bases:

>100_bases
ATGAAACGCGTGAAGAATTTTCTTTTCCTGCTGGTGGCCGCGCCCGTCGTGGCTTTTGCATCGGGCCCCAGCGTTCACCT
GGACAAGGCGCCGGTCAACC

Product: cytochrome B subunit of cytochrome bc1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSALQKMMGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAELAFASVEYIMRDV
DWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFA
AVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFH
PYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAM
GMSIVLLFFLPWLDRSKVKSIRYRGPIYKIALALFIVAFVGLGYLGLLPATPIATLIAQVLSVIYFLFFLLMPWYTSIDK
TKPEPERVTG

Sequences:

>Translated_410_residues
MSALQKMMGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAELAFASVEYIMRDV
DWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFA
AVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFH
PYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAM
GMSIVLLFFLPWLDRSKVKSIRYRGPIYKIALALFIVAFVGLGYLGLLPATPIATLIAQVLSVIYFLFFLLMPWYTSIDK
TKPEPERVTG
>Mature_409_residues
SALQKMMGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAELAFASVEYIMRDVD
WGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAA
VPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHP
YYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAMG
MSIVLLFFLPWLDRSKVKSIRYRGPIYKIALALFIVAFVGLGYLGLLPATPIATLIAQVLSVIYFLFFLLMPWYTSIDKT
KPEPERVTG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=372, Percent_Identity=45.9677419354839, Blast_Score=288, Evalue=6e-78,
Organism=Saccharomyces cerevisiae, GI6226529, Length=371, Percent_Identity=43.3962264150943, Blast_Score=281, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=48.1327800829876, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=53.2894736842105, Blast_Score=163, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=51.8248175182482, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 46546; Mature: 46415

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SALQKMMGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTM
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
NYKPDAELAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPREL
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
IWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVIS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEE
DATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC
PYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADPLKTPEHIAPLWYFTPFY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
AILRAVPPLFGSQFPGVVAMGMSIVLLFFLPWLDRSKVKSIRYRGPIYKIALALFIVAFV
HHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
GLGYLGLLPATPIATLIAQVLSVIYFLFFLLMPWYTSIDKTKPEPERVTG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA