Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317837

Identifier: 74317837

GI number: 74317837

Start: 1918187

End: 1918948

Strand: Reverse

Name: 74317837

Synonym: Tbd_1819

Alternate gene names: NA

Gene position: 1918948-1918187 (Counterclockwise)

Preceding gene: 74317838

Following gene: 74317836

Centisome position: 65.95

GC content: 65.49

Gene sequence:

>762_bases
ATGAGGTCGCATGCCCTTACCCCCCTCGCGCTCACCCTCGCCACCCTCGCCATACCGGCTCACGCCGGCGCGATGACAGG
CGGGGCCACGGAGTGGACTCAGATCGCGAACCACGTCGAACTGGTGATGCAGGTTAGCGAGGCCATCAACACCACTTCGA
ACACGCTCATGACAGCGCAGGCGACGATGCAGCAGCTTCGCCAGTTGCCGCAGTCCGTCACCAACTCTATGAACGGGCCG
GCCCTTGAGAAAGTGCGTGCTCTGGCGGAGGCCTACAGGGTGATGTCACAGGCCCGTGGCACGTACGAGGACGCCGCCGG
GGTGCTGCGCAAGGCCGCTACCGACTCGGAGCGTCTCGGCATCACGCCGTCCGAGTTGCTGCGCCTGAAGGCGGATGCCG
CCTACAAGCATGGCGGCGTCTACCAGCGGAGTTACGAGCAGGAGCAGGAGAAGCTGCGGCGCCTCGCCGAAACCTCAAGG
GATGTCCAGAACCAGGCCAACACGGTGAAGAGCATCGACGCCAACGTGAAGGGCATCCAGTTTCTTGCGACGCAGAACGT
GCAGATGCAGGCGACGTTGGCGGATATCGCCGGTTCGATCTCCACCGCCAATGCCAATGCCGCTGAGGCCGCGCGGCTGG
CCGCAGTCGAGAAGGGCAGAGCGGCCGACCGCGAGCGGGAGATGCGGGCCGCGCGCGCACGTGCCGCACGGACGCCGGAC
GCGGGAATCAAGATGCCGTTTGAGCAGCAGCTGGTGAAATGA

Upstream 100 bases:

>100_bases
AGGCCGGCGAGGCCGCACTGCGCGCCCAAGGAAAGCAGCCAGCCGCCATCGCGCGCACCGTGCTCGATCATGTGCAGTTG
CACGCGCGGAGGCCTGACAA

Downstream 100 bases:

>100_bases
GGTGCGGAACATGAGCAGCGACAACAACAAAACCGTGGATCTTGTCGCTCGCCTCGTCGCGCGCGGCGAGCATGAGCGTG
CCGATCTGGTCGCCGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRSHALTPLALTLATLAIPAHAGAMTGGATEWTQIANHVELVMQVSEAINTTSNTLMTAQATMQQLRQLPQSVTNSMNGP
ALEKVRALAEAYRVMSQARGTYEDAAGVLRKAATDSERLGITPSELLRLKADAAYKHGGVYQRSYEQEQEKLRRLAETSR
DVQNQANTVKSIDANVKGIQFLATQNVQMQATLADIAGSISTANANAAEAARLAAVEKGRAADREREMRAARARAARTPD
AGIKMPFEQQLVK

Sequences:

>Translated_253_residues
MRSHALTPLALTLATLAIPAHAGAMTGGATEWTQIANHVELVMQVSEAINTTSNTLMTAQATMQQLRQLPQSVTNSMNGP
ALEKVRALAEAYRVMSQARGTYEDAAGVLRKAATDSERLGITPSELLRLKADAAYKHGGVYQRSYEQEQEKLRRLAETSR
DVQNQANTVKSIDANVKGIQFLATQNVQMQATLADIAGSISTANANAAEAARLAAVEKGRAADREREMRAARARAARTPD
AGIKMPFEQQLVK
>Mature_253_residues
MRSHALTPLALTLATLAIPAHAGAMTGGATEWTQIANHVELVMQVSEAINTTSNTLMTAQATMQQLRQLPQSVTNSMNGP
ALEKVRALAEAYRVMSQARGTYEDAAGVLRKAATDSERLGITPSELLRLKADAAYKHGGVYQRSYEQEQEKLRRLAETSR
DVQNQANTVKSIDANVKGIQFLATQNVQMQATLADIAGSISTANANAAEAARLAAVEKGRAADREREMRAARARAARTPD
AGIKMPFEQQLVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27299; Mature: 27299

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSHALTPLALTLATLAIPAHAGAMTGGATEWTQIANHVELVMQVSEAINTTSNTLMTAQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATMQQLRQLPQSVTNSMNGPALEKVRALAEAYRVMSQARGTYEDAAGVLRKAATDSERLG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
ITPSELLRLKADAAYKHGGVYQRSYEQEQEKLRRLAETSRDVQNQANTVKSIDANVKGIQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
FLATQNVQMQATLADIAGSISTANANAAEAARLAAVEKGRAADREREMRAARARAARTPD
EEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
AGIKMPFEQQLVK
CCCCCCHHHHHCC
>Mature Secondary Structure
MRSHALTPLALTLATLAIPAHAGAMTGGATEWTQIANHVELVMQVSEAINTTSNTLMTAQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATMQQLRQLPQSVTNSMNGPALEKVRALAEAYRVMSQARGTYEDAAGVLRKAATDSERLG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
ITPSELLRLKADAAYKHGGVYQRSYEQEQEKLRRLAETSRDVQNQANTVKSIDANVKGIQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
FLATQNVQMQATLADIAGSISTANANAAEAARLAAVEKGRAADREREMRAARARAARTPD
EEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
AGIKMPFEQQLVK
CCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA