Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317834

Identifier: 74317834

GI number: 74317834

Start: 1916321

End: 1916728

Strand: Direct

Name: 74317834

Synonym: Tbd_1816

Alternate gene names: NA

Gene position: 1916321-1916728 (Clockwise)

Preceding gene: 74317830

Following gene: 74317840

Centisome position: 65.86

GC content: 64.95

Gene sequence:

>408_bases
ATGGCTTCTACGAGCTTGGATTTTGGGGTTTCGGTCATGGTCGTGGTGCTCATGCTTGTCTCCTTTTGCCTTCAAAACTG
CCGGATTCGAAGATTCTGGAGCCCCGGCTTTCTGCTCCGGCGCTGGCTGGTGTCCTGCTTGCCCGCGCTGCCGTCTTTCG
TGAGTTCCTTCGCCCTTGCGACGGGTTTAGACGGGCTGGCGGGGGATGCAAGGGGACGTGGAATAAATGTCGGCCCACCG
GGCGCGGGCTTTTTTGCGCCCGGCGGGCCGATCGTTTTATGCCGCGAAAGCCCCTTGCAAGGCGATGACACGGGGCACGG
CGCGCTTAAGGCGGGCGGCAGCTTGCCCGCCCGCGCGACGGGGCACGGGGCAGCGCCGGTCCCCCGCCAGCCCGGCTATG
GTCGCTAA

Upstream 100 bases:

>100_bases
ATGTTTGGCTATGGCATCAACCAACATATCGGTTTTCAACGCCAACTCGTGTGCCATTGATTCACAAATGTCTGGAATTG
CCTGAAATTGCCCGCGTTCG

Downstream 100 bases:

>100_bases
AAAAGGGCGAAGGAACTCACGAAAGACGGTGCGGTTTGCGCGGGTCGCCCCGGCTGCGACGGTGCGGCTTTGAAGGTTTT
CTGACCATCGCGACGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MASTSLDFGVSVMVVVLMLVSFCLQNCRIRRFWSPGFLLRRWLVSCLPALPSFVSSFALATGLDGLAGDARGRGINVGPP
GAGFFAPGGPIVLCRESPLQGDDTGHGALKAGGSLPARATGHGAAPVPRQPGYGR

Sequences:

>Translated_135_residues
MASTSLDFGVSVMVVVLMLVSFCLQNCRIRRFWSPGFLLRRWLVSCLPALPSFVSSFALATGLDGLAGDARGRGINVGPP
GAGFFAPGGPIVLCRESPLQGDDTGHGALKAGGSLPARATGHGAAPVPRQPGYGR
>Mature_134_residues
ASTSLDFGVSVMVVVLMLVSFCLQNCRIRRFWSPGFLLRRWLVSCLPALPSFVSSFALATGLDGLAGDARGRGINVGPPG
AGFFAPGGPIVLCRESPLQGDDTGHGALKAGGSLPARATGHGAAPVPRQPGYGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13936; Mature: 13805

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTSLDFGVSVMVVVLMLVSFCLQNCRIRRFWSPGFLLRRWLVSCLPALPSFVSSFALA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGLDGLAGDARGRGINVGPPGAGFFAPGGPIVLCRESPLQGDDTGHGALKAGGSLPARAT
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GHGAAPVPRQPGYGR
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASTSLDFGVSVMVVVLMLVSFCLQNCRIRRFWSPGFLLRRWLVSCLPALPSFVSSFALA
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGLDGLAGDARGRGINVGPPGAGFFAPGGPIVLCRESPLQGDDTGHGALKAGGSLPARAT
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GHGAAPVPRQPGYGR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA