Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317781

Identifier: 74317781

GI number: 74317781

Start: 1855913

End: 1856917

Strand: Direct

Name: 74317781

Synonym: Tbd_1763

Alternate gene names: NA

Gene position: 1855913-1856917 (Clockwise)

Preceding gene: 74317775

Following gene: 74317785

Centisome position: 63.78

GC content: 69.35

Gene sequence:

>1005_bases
ATGCTGCTTCTCGTTCCGCATCTGTTCCCCTCGCAGCGCCTGCTCGACGTCGCCACGGCCAATCTTCGCCTCCCCGCCCT
GCAGACGCTGCTCGCGCGCGGCACGCGCCGGCGGGAGCCGGCCGAGGGAACATTGGCCGCCGTCTGCAAGGCACTCGGTA
TCGCCCGCCAGCAGGACTGGCCGCTCGCGCCGCTCGCGCTCGAGTCCGAGGGCGAAGCGGCGGGAGACGACTACTGGCTG
CGCGCGGATCCGGTGCATCTTCGCGTCATGCGGGACCGCATCGTCCTGCTCGCGGGCGACGAAATCGGGCTCGCGCAAGA
CGAGGCAGATGTGCTTGCGGGCGCAGTCGCCGCGCACTTCGGTGCGGAACTCAGCCCGCGGCCACTTCGCCCTCATCGCT
GGTATGTCCGCCTCGCACATCCTCCGGCCCTGGCGACGACAGGGCTCGCTGCGGCGATCGGCCGCGAGGTCGACCTGCTG
CTGCCCGAAGGACGCGACGCCATGCGTTTCCGTGCATACCTGAACGAAGTGCAGATGCTGCTGCACGAGCATCCGGTCAA
CCTGCGACGCGAAGCCCGTGGCGAGCTGGCGGTCAATTCGCTTTGGCTCTGGGGCGGCGGTACACGGCCTGCACCCGTTG
CAGGACCCGTGCCCGCGCTCCGCGCGAACGCGGCCGAAGCGCGGGCGGCCGGCAGTTTTTGCGGCGCACAGCTTCGTCCC
GTACCGGAACGCTTCGACAAGGCGTTACTCGAGGGCCAAGACCTCATCGTCCTCGACGCCTTGGAACGGCCGGGGCAGTA
TGGTGACGCGCAGGGGTGGCGTGAAGCGCTCGGGCGACTCGAAACGAACTGGTTCGCGCCGCTGCTCAGAGCCCTTCGCG
TAACGCCAGCGCGTCGTGTGCAAGTCCGCGACCCCGTCAGCGGCCATGGCCTCGATCTGCGTGCGTCGGGCTTATGGCAA
GTCTGGCGACGCTCGGGTCCCCTCGCCTCGCTGCTTGCCGAGTAG

Upstream 100 bases:

>100_bases
CGTCGGTGCAGGCGTAGAGTCCCTTGCCGCGGGTCGGGACCGTGATGGTGTCGATGATCTGACGCATGGATGCCATTTTA
GCTTTGCTACACTCGCAGCC

Downstream 100 bases:

>100_bases
GCGGCTTCAGACCGGTGTCGCCCAGAGATCGTGGGCGTCGGCTTCGTCGACTTTCACCGTGAGGCGCGTCCCGGGCTTCA
GACCGAAGACGCCCTCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: 2 3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase; Regulatory Protein; Regulatory Protein RpfE; Regulatory Protein Rpfe

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDWPLAPLALESEGEAAGDDYWL
RADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHFGAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLL
LPEGRDAMRFRAYLNEVQMLLHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP
VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRVQVRDPVSGHGLDLRASGLWQ
VWRRSGPLASLLAE

Sequences:

>Translated_334_residues
MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDWPLAPLALESEGEAAGDDYWL
RADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHFGAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLL
LPEGRDAMRFRAYLNEVQMLLHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP
VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRVQVRDPVSGHGLDLRASGLWQ
VWRRSGPLASLLAE
>Mature_334_residues
MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDWPLAPLALESEGEAAGDDYWL
RADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHFGAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLL
LPEGRDAMRFRAYLNEVQMLLHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP
VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRVQVRDPVSGHGLDLRASGLWQ
VWRRSGPLASLLAE

Specific function: Unknown

COG id: COG4255

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36526; Mature: 36526

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDW
CEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PLAPLALESEGEAAGDDYWLRADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHF
CCCCEEECCCCCCCCCCEEEECCCEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHH
GAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLLLPEGRDAMRFRAYLNEVQML
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH
LHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP
HHHCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCC
VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRV
CHHHHHHHHHCCCCEEEEECHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE
QVRDPVSGHGLDLRASGLWQVWRRSGPLASLLAE
EECCCCCCCCCEEEHHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure
MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDW
CEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PLAPLALESEGEAAGDDYWLRADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHF
CCCCEEECCCCCCCCCCEEEECCCEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHH
GAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLLLPEGRDAMRFRAYLNEVQML
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH
LHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP
HHHCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCC
VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRV
CHHHHHHHHHCCCCEEEEECHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE
QVRDPVSGHGLDLRASGLWQVWRRSGPLASLLAE
EECCCCCCCCCEEEHHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA