| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317781
Identifier: 74317781
GI number: 74317781
Start: 1855913
End: 1856917
Strand: Direct
Name: 74317781
Synonym: Tbd_1763
Alternate gene names: NA
Gene position: 1855913-1856917 (Clockwise)
Preceding gene: 74317775
Following gene: 74317785
Centisome position: 63.78
GC content: 69.35
Gene sequence:
>1005_bases ATGCTGCTTCTCGTTCCGCATCTGTTCCCCTCGCAGCGCCTGCTCGACGTCGCCACGGCCAATCTTCGCCTCCCCGCCCT GCAGACGCTGCTCGCGCGCGGCACGCGCCGGCGGGAGCCGGCCGAGGGAACATTGGCCGCCGTCTGCAAGGCACTCGGTA TCGCCCGCCAGCAGGACTGGCCGCTCGCGCCGCTCGCGCTCGAGTCCGAGGGCGAAGCGGCGGGAGACGACTACTGGCTG CGCGCGGATCCGGTGCATCTTCGCGTCATGCGGGACCGCATCGTCCTGCTCGCGGGCGACGAAATCGGGCTCGCGCAAGA CGAGGCAGATGTGCTTGCGGGCGCAGTCGCCGCGCACTTCGGTGCGGAACTCAGCCCGCGGCCACTTCGCCCTCATCGCT GGTATGTCCGCCTCGCACATCCTCCGGCCCTGGCGACGACAGGGCTCGCTGCGGCGATCGGCCGCGAGGTCGACCTGCTG CTGCCCGAAGGACGCGACGCCATGCGTTTCCGTGCATACCTGAACGAAGTGCAGATGCTGCTGCACGAGCATCCGGTCAA CCTGCGACGCGAAGCCCGTGGCGAGCTGGCGGTCAATTCGCTTTGGCTCTGGGGCGGCGGTACACGGCCTGCACCCGTTG CAGGACCCGTGCCCGCGCTCCGCGCGAACGCGGCCGAAGCGCGGGCGGCCGGCAGTTTTTGCGGCGCACAGCTTCGTCCC GTACCGGAACGCTTCGACAAGGCGTTACTCGAGGGCCAAGACCTCATCGTCCTCGACGCCTTGGAACGGCCGGGGCAGTA TGGTGACGCGCAGGGGTGGCGTGAAGCGCTCGGGCGACTCGAAACGAACTGGTTCGCGCCGCTGCTCAGAGCCCTTCGCG TAACGCCAGCGCGTCGTGTGCAAGTCCGCGACCCCGTCAGCGGCCATGGCCTCGATCTGCGTGCGTCGGGCTTATGGCAA GTCTGGCGACGCTCGGGTCCCCTCGCCTCGCTGCTTGCCGAGTAG
Upstream 100 bases:
>100_bases CGTCGGTGCAGGCGTAGAGTCCCTTGCCGCGGGTCGGGACCGTGATGGTGTCGATGATCTGACGCATGGATGCCATTTTA GCTTTGCTACACTCGCAGCC
Downstream 100 bases:
>100_bases GCGGCTTCAGACCGGTGTCGCCCAGAGATCGTGGGCGTCGGCTTCGTCGACTTTCACCGTGAGGCGCGTCCCGGGCTTCA GACCGAAGACGCCCTCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: 2 3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase; Regulatory Protein; Regulatory Protein RpfE; Regulatory Protein Rpfe
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDWPLAPLALESEGEAAGDDYWL RADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHFGAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLL LPEGRDAMRFRAYLNEVQMLLHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRVQVRDPVSGHGLDLRASGLWQ VWRRSGPLASLLAE
Sequences:
>Translated_334_residues MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDWPLAPLALESEGEAAGDDYWL RADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHFGAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLL LPEGRDAMRFRAYLNEVQMLLHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRVQVRDPVSGHGLDLRASGLWQ VWRRSGPLASLLAE >Mature_334_residues MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDWPLAPLALESEGEAAGDDYWL RADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHFGAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLL LPEGRDAMRFRAYLNEVQMLLHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRVQVRDPVSGHGLDLRASGLWQ VWRRSGPLASLLAE
Specific function: Unknown
COG id: COG4255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36526; Mature: 36526
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDW CEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC PLAPLALESEGEAAGDDYWLRADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHF CCCCEEECCCCCCCCCCEEEECCCEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHH GAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLLLPEGRDAMRFRAYLNEVQML CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH LHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP HHHCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCC VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRV CHHHHHHHHHCCCCEEEEECHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE QVRDPVSGHGLDLRASGLWQVWRRSGPLASLLAE EECCCCCCCCCEEEHHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure MLLLVPHLFPSQRLLDVATANLRLPALQTLLARGTRRREPAEGTLAAVCKALGIARQQDW CEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC PLAPLALESEGEAAGDDYWLRADPVHLRVMRDRIVLLAGDEIGLAQDEADVLAGAVAAHF CCCCEEECCCCCCCCCCEEEECCCEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHH GAELSPRPLRPHRWYVRLAHPPALATTGLAAAIGREVDLLLPEGRDAMRFRAYLNEVQML CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH LHEHPVNLRREARGELAVNSLWLWGGGTRPAPVAGPVPALRANAAEARAAGSFCGAQLRP HHHCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCC VPERFDKALLEGQDLIVLDALERPGQYGDAQGWREALGRLETNWFAPLLRALRVTPARRV CHHHHHHHHHCCCCEEEEECHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE QVRDPVSGHGLDLRASGLWQVWRRSGPLASLLAE EECCCCCCCCCEEEHHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA