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The map label for this gene is atpC1

Identifier: 74317760

GI number: 74317760

Start: 1830404

End: 1830829

Strand: Direct

Name: atpC1

Synonym: Tbd_1742

Alternate gene names: 74317760

Gene position: 1830404-1830829 (Clockwise)

Preceding gene: 74317759

Following gene: 74317767

Centisome position: 62.9

GC content: 66.2

Gene sequence:

>426_bases
ATGGCAATGACGATGCGCCTGGACGTGGTGAGTGTCGAAGGCTCACTCTTCTCGGGCATCGTCGAGTCGGTCGTCGCGCC
GGCCGAGATGGGTGCGGTCGGCATCTACCCCGGGCATGCGCCGCTGCTCACCCGTCTCAAGCCCGGCGCCGTGCGGCTGA
GAATTCCGTATCAGGCCGAGGAGGAGATCGTCTACGTCTCGGGCGGCATGCTCGAGGTGCAACCCTACAAGGTGACGCTG
CTCGCCGACGTCGCGATGCGGGAAAAAGCGCTCGCGGAAGCGGACCTCCACGCTGAGAAGCACAGGGCCGAAGCGGTCCT
GAAGGACCGCGTCACGGCGGACGCCTACGCCCGGCTCGAAGTGGAGCTGGCGAAGGCGCTCACCTACGTGCAGGGTGTGC
AGAAGTTGCGTCGGCGCGGGTTTTAG

Upstream 100 bases:

>100_bases
CGATGCGGTGTCGGGCACTTCGGTGCGCAACGGGCTGCCCGCGAGCGTGGCGCGCGCGTAAGCTTCACACCGAGGCCGCA
CGAGCGAGAGGAGACGAAGC

Downstream 100 bases:

>100_bases
GCAGGCGCGGCGGGCAGGGCCCGAGCGGTCCGCCGCTCAGTCGAGATCGGCCGGATCGGCGCGCAGCATCAGCCGCGCCA
ATTCGGCGGCCGACCCGGTG

Product: H+-transporting two-sector ATPase, delta/subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit 1; F-ATPase epsilon subunit 1

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAMTMRLDVVSVEGSLFSGIVESVVAPAEMGAVGIYPGHAPLLTRLKPGAVRLRIPYQAEEEIVYVSGGMLEVQPYKVTL
LADVAMREKALAEADLHAEKHRAEAVLKDRVTADAYARLEVELAKALTYVQGVQKLRRRGF

Sequences:

>Translated_141_residues
MAMTMRLDVVSVEGSLFSGIVESVVAPAEMGAVGIYPGHAPLLTRLKPGAVRLRIPYQAEEEIVYVSGGMLEVQPYKVTL
LADVAMREKALAEADLHAEKHRAEAVLKDRVTADAYARLEVELAKALTYVQGVQKLRRRGF
>Mature_140_residues
AMTMRLDVVSVEGSLFSGIVESVVAPAEMGAVGIYPGHAPLLTRLKPGAVRLRIPYQAEEEIVYVSGGMLEVQPYKVTLL
ADVAMREKALAEADLHAEKHRAEAVLKDRVTADAYARLEVELAKALTYVQGVQKLRRRGF

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=138, Percent_Identity=44.9275362318841, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE1_THIDA (Q3SI38)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_315500.1
- ProteinModelPortal:   Q3SI38
- SMR:   Q3SI38
- STRING:   Q3SI38
- GeneID:   3671327
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1742
- NMPDR:   fig|292415.3.peg.1839
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   LAHIDHA
- PhylomeDB:   Q3SI38
- BioCyc:   TDEN292415:TBD_1742-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15435; Mature: 15304

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTMRLDVVSVEGSLFSGIVESVVAPAEMGAVGIYPGHAPLLTRLKPGAVRLRIPYQAE
CCEEEEEEEEEECCHHHHHHHHHHHCCHHCCEEEECCCCCHHHHCCCCCEEEEEECCCCC
EEIVYVSGGMLEVQPYKVTLLADVAMREKALAEADLHAEKHRAEAVLKDRVTADAYARLE
CCEEEEECCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VELAKALTYVQGVQKLRRRGF
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMTMRLDVVSVEGSLFSGIVESVVAPAEMGAVGIYPGHAPLLTRLKPGAVRLRIPYQAE
CEEEEEEEEEECCHHHHHHHHHHHCCHHCCEEEECCCCCHHHHCCCCCEEEEEECCCCC
EEIVYVSGGMLEVQPYKVTLLADVAMREKALAEADLHAEKHRAEAVLKDRVTADAYARLE
CCEEEEECCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VELAKALTYVQGVQKLRRRGF
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA