| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ygcG [H]
Identifier: 74317738
GI number: 74317738
Start: 1806050
End: 1807012
Strand: Reverse
Name: ygcG [H]
Synonym: Tbd_1720
Alternate gene names: 74317738
Gene position: 1807012-1806050 (Counterclockwise)
Preceding gene: 74317739
Following gene: 74317737
Centisome position: 62.1
GC content: 69.89
Gene sequence:
>963_bases GTGGAAGGGACGACACGTGTCACGGGAGCGACGCAAGCCGCGAGCTGCCACGGCGGCCGTGCCGCCCGATGGCGCGCTGG CTGCTCCCTCAAGATCAGGATGCTGACCCACAGTCTCCTCGGCGCCCGGCGCCGCGTCGGGCATGCCCTGGGCGTTTTTC TGCTGCTGGTGGCGTCGAGTGCGCTCGCGCAGATCGAGGTGCCCGAGCTCGCGCGGCGCGTGACCGACCTCACTGCCACG CTTACGCCCGCTCAGGTCGGTGAACTCGAGGGCAGGCTTGCCGCCTTCGAGGCCGAGCGGGGCAGCCAGATCGCGGTGTT GATCGTGCCGACGACCGAGCCCGAGGACATCGCGCAATTCGGCATCCGCGTCGCCGAGCAATGGAAAATCGGCCGCGAGA AGGCCGACGACGGGGTGATCCTGATCATCGCCAAGGATGACCGTCGCCTGCGCCTCGAAGTCGGCTACGGTCTCGAGGGC GCGATCCCCGATGCGATCGCCCGGCGCGTGATTGCCGAAACGATCACGCCGCGTTTCAAGGCGGGCGACTTCTACGGTGG CATCGTGGCCGGTGTCGAGCAGGTCATGCGTCTGATCGAGGGCGAGGCGCTTCCCCCGCCCGAGCGTAAATCCGCGGTGG AAGGCGAAGCCTCGTTCGTGCTTCTGGTGGTAGGGGGAATGGCGGCGGGCTGGCTGCTCTCGCTGCTGATGAGTCGCCCT GCGGCCGGCGGGGTTGCCGCGCTCGGCAGCGGCGCCGTCGGCGCGATGCTGCTCGGCATGACGCCCATGCTGCTCTTGAT CGCGCTGTTCGTTTTCGCCGGCGTGGTGACAGGGTTCTGGCACGGAGGCGGCGGCTGGGCCAGCCGGGGAGGCGGATTTG GCGGCCGCGGCGGAGGGTTCGGTGGCGGTTTCGGTGGCGGAGGGGGCGCTTTCGGCGGCGGGGGCGCCTCGGGATCATGG TGA
Upstream 100 bases:
>100_bases CCGGGCGCACCGGCGAACGCGCCTGCCAACCAAGGCGCCCCGGCGGGCAGCGGTGCAGCGGGCTATTGACCCGTCGACCG CGTCGCCGGGGACGCGTTGG
Downstream 100 bases:
>100_bases ATTTCCGCCGCTGGTTCAGGCATCTCTTCATGCCGCCGCGCGCCTGGCAGCGCGCCTTCCCGCAGGCCACGCTCGACGCG ATCGAGTCGGCGGTGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASSALAQIEVPELARRVTDLTAT LTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQFGIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEG AIPDAIARRVIAETITPRFKAGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGFGGGFGGGGGAFGGGGASGSW
Sequences:
>Translated_320_residues MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASSALAQIEVPELARRVTDLTAT LTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQFGIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEG AIPDAIARRVIAETITPRFKAGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGFGGGFGGGGGAFGGGGASGSW >Mature_320_residues MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASSALAQIEVPELARRVTDLTAT LTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQFGIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEG AIPDAIARRVIAETITPRFKAGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGFGGGFGGGGGAFGGGGASGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=140, Percent_Identity=36.4285714285714, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 32800; Mature: 32800
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASS CCCCCCCCCCCCHHCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAQIEVPELARRVTDLTATLTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQF HHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHEEEECCCCCEEEEEEEECCCHHHHHHH GIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEGAIPDAIARRVIAETITPRFK HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC AGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCC AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGF CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GGGFGGGGGAFGGGGASGSW CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASS CCCCCCCCCCCCHHCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAQIEVPELARRVTDLTATLTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQF HHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHEEEECCCCCEEEEEEEECCCHHHHHHH GIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEGAIPDAIARRVIAETITPRFK HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC AGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCC AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGF CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GGGFGGGGGAFGGGGASGSW CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]