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The map label for this gene is 74317714

Identifier: 74317714

GI number: 74317714

Start: 1787568

End: 1788413

Strand: Direct

Name: 74317714

Synonym: Tbd_1696

Alternate gene names: NA

Gene position: 1787568-1788413 (Clockwise)

Preceding gene: 74317711

Following gene: 74317715

Centisome position: 61.43

GC content: 64.78

Gene sequence:

>846_bases
GTGTCTAAGTCATTATTCCCATTCCGTTTTTTATTGCCGGTGCCGGTCGACCACTACGAAAACTTCCCCGTCGCGTCCTG
GCTGCTGCCCGGGCGGCTACGGGAACCGGTAAGCGCCATCTATCGCTTCGCCCGCAGCGCGGACGACCTCGCCGACGAGG
GCGACGCACCGCCCAGGGCTCGCCTGCAGGAATTGGCGCGCTACCACAGCGAACTCGACCGTATCGAACGCGGTGAAATT
CCCGACGACCCGATCTTCGGGCGCCTCGCCGCCGCTATTCGGGCGCACGCGCTGCCGCTCACGCCGTTTCGCGACCTTCT
GTCCGCCTTCGCGCAGGACATCGAGAAAACCCGCTACGCCAGCTTCGGCGAGGTCATGGATTATTGCAGGCGCTCGGCCA
ATCCGGTCGGACGCCTGATGCTGCATCTGTACGGCGACCACGACCCGCGCCACCAGGCCTATTCAGACGCCATCTGCAGC
AGCCTGCAACTGATCAACTTCCTGCAGGACGTCGCGATCGACTATGCCAAGGGCCGCATTTATCTGCCGCAGGACGAACT
CGCCGCACATCACGTCAGCGAGGCGCAAATTGCCGCGGGCGATGCCGGCGGGCTCTGGCGCATGATGATGCATAAACAGA
TCGAACGCGCCCGCAAGCTGCTGCAGGCCGGCGCACCGCTCGGGCGCGCGCTCGACGGACGCATCGGGCTCGAACTCCGG
GTAACGATTCGCGGCGGCGAAACGATCCTGCGCAAGCTTCACGCCGATCCGGGCTGCGTGTTCGGTGCACGTCCCGTCCT
CGGCAAGAGGGACTGGATCGTCATGCTCGCGCGCAGCGTTCTCTGA

Upstream 100 bases:

>100_bases
GTCTACCAATTCCGCCACTCTCGCGGCCCGGCCGCAAAACCTCCAACGAATAAGTGTAATATAATCAACGCGATGGTGTC
ACCCAAGCGGGCTCGGCATC

Downstream 100 bases:

>100_bases
AGATGGACGCGCATCGCTACTGCCAGGAGCGCGCCGCCGCAAGCGGCTCCAGCTTCTACTACAGTTTCGTCTTCCTGCCG
ACCGAAGTGCGCCGCGCGAT

Product: putative phytoene synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSKSLFPFRFLLPVPVDHYENFPVASWLLPGRLREPVSAIYRFARSADDLADEGDAPPRARLQELARYHSELDRIERGEI
PDDPIFGRLAAAIRAHALPLTPFRDLLSAFAQDIEKTRYASFGEVMDYCRRSANPVGRLMLHLYGDHDPRHQAYSDAICS
SLQLINFLQDVAIDYAKGRIYLPQDELAAHHVSEAQIAAGDAGGLWRMMMHKQIERARKLLQAGAPLGRALDGRIGLELR
VTIRGGETILRKLHADPGCVFGARPVLGKRDWIVMLARSVL

Sequences:

>Translated_281_residues
MSKSLFPFRFLLPVPVDHYENFPVASWLLPGRLREPVSAIYRFARSADDLADEGDAPPRARLQELARYHSELDRIERGEI
PDDPIFGRLAAAIRAHALPLTPFRDLLSAFAQDIEKTRYASFGEVMDYCRRSANPVGRLMLHLYGDHDPRHQAYSDAICS
SLQLINFLQDVAIDYAKGRIYLPQDELAAHHVSEAQIAAGDAGGLWRMMMHKQIERARKLLQAGAPLGRALDGRIGLELR
VTIRGGETILRKLHADPGCVFGARPVLGKRDWIVMLARSVL
>Mature_280_residues
SKSLFPFRFLLPVPVDHYENFPVASWLLPGRLREPVSAIYRFARSADDLADEGDAPPRARLQELARYHSELDRIERGEIP
DDPIFGRLAAAIRAHALPLTPFRDLLSAFAQDIEKTRYASFGEVMDYCRRSANPVGRLMLHLYGDHDPRHQAYSDAICSS
LQLINFLQDVAIDYAKGRIYLPQDELAAHHVSEAQIAAGDAGGLWRMMMHKQIERARKLLQAGAPLGRALDGRIGLELRV
TIRGGETILRKLHADPGCVFGARPVLGKRDWIVMLARSVL

Specific function: Probably part of the operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017827
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: NA

Molecular weight: Translated: 31556; Mature: 31425

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSLFPFRFLLPVPVDHYENFPVASWLLPGRLREPVSAIYRFARSADDLADEGDAPPRA
CCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RLQELARYHSELDRIERGEIPDDPIFGRLAAAIRAHALPLTPFRDLLSAFAQDIEKTRYA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SFGEVMDYCRRSANPVGRLMLHLYGDHDPRHQAYSDAICSSLQLINFLQDVAIDYAKGRI
HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
YLPQDELAAHHVSEAQIAAGDAGGLWRMMMHKQIERARKLLQAGAPLGRALDGRIGLELR
ECCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEE
VTIRGGETILRKLHADPGCVFGARPVLGKRDWIVMLARSVL
EEEECHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
SKSLFPFRFLLPVPVDHYENFPVASWLLPGRLREPVSAIYRFARSADDLADEGDAPPRA
CCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RLQELARYHSELDRIERGEIPDDPIFGRLAAAIRAHALPLTPFRDLLSAFAQDIEKTRYA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SFGEVMDYCRRSANPVGRLMLHLYGDHDPRHQAYSDAICSSLQLINFLQDVAIDYAKGRI
HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
YLPQDELAAHHVSEAQIAAGDAGGLWRMMMHKQIERARKLLQAGAPLGRALDGRIGLELR
ECCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEE
VTIRGGETILRKLHADPGCVFGARPVLGKRDWIVMLARSVL
EEEECHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]