Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317711

Identifier: 74317711

GI number: 74317711

Start: 1782860

End: 1785352

Strand: Direct

Name: 74317711

Synonym: Tbd_1693

Alternate gene names: NA

Gene position: 1782860-1785352 (Clockwise)

Preceding gene: 74317710

Following gene: 74317714

Centisome position: 61.27

GC content: 60.77

Gene sequence:

>2493_bases
ATGGCAGAACGTCTGCCCCACCTGATCTTCAACAGCACAGCAATAACAAAGCAGTACCAACGACCCAGCCGCAAGATTGA
CATCGAATTCCCCCTTAAGGAGCGAGACCGCCAGCAGCACGGCGCACAACTTCTGGAAGCTTTGCGCCAAGCCAAAACTC
AGGAACCCGGCATCATCTCGGGACAGCAGACATTGGGCCGCGATGCCGAATTCACTGGCGTGTACCTAACTTTCGAAAGC
GACCCTGGTTTTGAACTGGCCTTCGAAAGCTTGGGCTTCGCCCCGAGCAGAATCGAACTACTGGTGGTCAAGCAGGAAGG
CGAACGAATGCTAGCCACCGTTTTCGTACCGGAAGGCAAAATCGGCTACTTCATCCGTCGGGTGGAGGCTTATCTAAATG
AGGGTAAGGACAAACCCAACAAGAAGGGCGAACTCCGGCCCCAATACAAAAAACTGGTGGAAAGCATCGCCTCCATCCGT
TTGGCCGCGTTGGAAGCTCTCTGGACCGACAGCCCCGATCTGTTCCCGCGCGATGAAACGCCGATCTGGTGGGAAGTCTG
GCTGCGCATCGGGGACGGTTTCGATGAAGTCGGTTTCTTCCGCACCCACGCCGCACAACTGAATTTAGAAGTGGCCGATG
ACGAAGTGCGTTTTCTCGAACGCTGTGTAGTCCTGGTGCGTGGCAGCCGCAGTCAACTCGCCCGTTCCCTGCAACTTTTG
GGTGGCATGGCTGAACTGCGCAAAGCGAAACAGAATGCCGAGCACTACACGACCATGAATGCTGTGCAACAGCACGCTGC
CGTTGCTGTCGCCGCGCAGTATCTTCAGACACCAGGGCCGGATGCCCCTGCTGTCTGCATATTGGACACTGGCGTCAGTC
AGGATCACCCGCTGCTGGCCCCCTTCCTTGATGCCCATGACAAACATGCCTGCCACCCGGATTGGGGAACCCATGATCAT
GATCGGTTGGGCCACGGCACCGCCATGGCCGGTCTCGCTTTGCACGGCGATCTGAGCGAAACCTTGGCCCAGCAGCCTTT
TCCTTCTCCGAGTCACCGCTTGGAGTCGGTCAAAGTCTTGCCGCCCACCGGCGACAACCCACCTCATCTTTACGGCTATC
GGTATAGCCAAGCGATGGACCGCGTGACGATTACCGCACCCCACCGCCGCCGCACCTTCTGTTCTGCCGTGACTACCACC
GACTCCCGCGACCGAGGTCGACCCTCATCTTGGTCAGCGCAGTTGGACAAGCTGGCAAGCGGCATGGAAGACGGTACGCA
ACGCCTGATCTTCCAGACTGCCGGTAACGCCGAGCATTCCAACATTACTGACTACCCCGCCAGCAACGCCCTCGACGGCA
TCCACGACCCGGCCCAATCCTGGAACGTACTCACCGTCGGGGCCTACACAGGCAAGTGGCAGATTGACGAGGCAACCTAC
CCGGGTCGCCAGCCCATTGCCCCGGCGGGCGCACTCGCACCTACCAGTTGCACCGCCGTGAGTTGGCCCACCAGCGGACG
CCAGAAATGGCCCAACAAACCGGACGTCGTATTGGAAGGCGGCAATTGGGCGCTGGACCCCGCTTTCAACTTCGCCGAAG
ACCTAGACAGCCTGCAACTCCTCAGTACCGGGCACGAACCACACACTAGGCCGCTGGTCACTTTCGGCGAGACCAGCGCC
GCCACCGCCCTGGCCGCCCGCATGGCGGCTGTATTGCAAAGCCACTACCCCGACCTCTGGCCTGAAACCTTGCGCGCCCT
GCTGGTCCACTCGTCGCAATGGACGTCGGCCATGAGGGCGGCGGTTGGCAACCTTCAGGTCAAGGGCAACGTTCGCCAGT
TGCTTCGTACCTGCGGCTTCGGCGTGCCGCAACTCGACGACGCCCTATGGAGCGCAAAACACGCCCTGACGCTGATCGTA
CAGGACGAGATGCAACCCTTCACTACTGGAGAGAACAGCACGATCCGCGCTCGCGACATCCACTACCACGCCCTGCCCTG
GCCGGCAGAGGCGCTGCGGGCGTTGCCACTGGGTACGCAGGTCGAGATGCGCGTCACCCTGTCCTACTTCATCCAGCCCA
ATCCCGGCCAACGCGGTTGGAGCGGAAAATTCAGCTATGCCTCCCACGGCCTGCGCTTCCGAGTAAAAGCGCCGGGGGAA
AGCCACGAAGCCTTCGAACAACGCATAAATCAGGCCGCCCGCGACGAGGAATACGAACGCACTGGCGTCAGCGACAGTGA
TTTCTGGGTAGTCGGCTCCGACACCCGCGAACTCGGCTCATTGCATTCCGACCTCTGGCAAGGCACGTCCGAGCAACTCG
CCGATTGCGGCTACCTCGCCATCTACCCCGTCACCGGCTGGTGGCGCACCCGCAAAGCCCTGAACCGCTGGCACTCCCGC
GCCCGCTACGCCCTTGTGGTCAGCATCCGCACTCCCGAGGAGTTGGTGGATATCTACACGCCAGTGGCGGCGGAAATTGG
CATCGCGGTCTGA

Upstream 100 bases:

>100_bases
TCCTCCATGACCGCCCGATGTTGGAAACGGCGGACATCCGCGCCACCCTGGAAGAAAGAAAAGCAACCCACGACCGATAA
CCCACCGACCGGAGGAGGCT

Downstream 100 bases:

>100_bases
ATGAACAGGGTAAGCCATGCGCGCCGACCCACCGCTCAAAGCGACAGGTATGCGCTGATTCCCGCCGTTTCGCAGCATCA
AGCGAGAATGACCGAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 830; Mature: 829

Protein sequence:

>830_residues
MAERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIISGQQTLGRDAEFTGVYLTFES
DPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGKIGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIR
LAALEALWTDSPDLFPRDETPIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL
GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLAPFLDAHDKHACHPDWGTHDH
DRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVLPPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTT
DSRDRGRPSSWSAQLDKLASGMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY
PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQLLSTGHEPHTRPLVTFGETSA
ATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRAAVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIV
QDEMQPFTTGENSTIRARDIHYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE
SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLAIYPVTGWWRTRKALNRWHSR
ARYALVVSIRTPEELVDIYTPVAAEIGIAV

Sequences:

>Translated_830_residues
MAERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIISGQQTLGRDAEFTGVYLTFES
DPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGKIGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIR
LAALEALWTDSPDLFPRDETPIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL
GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLAPFLDAHDKHACHPDWGTHDH
DRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVLPPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTT
DSRDRGRPSSWSAQLDKLASGMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY
PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQLLSTGHEPHTRPLVTFGETSA
ATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRAAVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIV
QDEMQPFTTGENSTIRARDIHYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE
SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLAIYPVTGWWRTRKALNRWHSR
ARYALVVSIRTPEELVDIYTPVAAEIGIAV
>Mature_829_residues
AERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIISGQQTLGRDAEFTGVYLTFESD
PGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGKIGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIRL
AALEALWTDSPDLFPRDETPIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLLG
GMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLAPFLDAHDKHACHPDWGTHDHD
RLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVLPPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTTD
SRDRGRPSSWSAQLDKLASGMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATYP
GRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQLLSTGHEPHTRPLVTFGETSAA
TALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRAAVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIVQ
DEMQPFTTGENSTIRARDIHYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGES
HEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLAIYPVTGWWRTRKALNRWHSRA
RYALVVSIRTPEELVDIYTPVAAEIGIAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92292; Mature: 92161

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIIS
CCCCCCHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GQQTLGRDAEFTGVYLTFESDPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGK
CHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCC
IGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIRLAALEALWTDSPDLFPRDET
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL
CEEEEEEEECCCCCHHHHHHEEEHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHH
GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH
PFLDAHDKHACHPDWGTHDHDRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVL
HHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHEEECCCHHHHHHHCCCCCCHHHCCEEEEE
PPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTTDSRDRGRPSSWSAQLDKLAS
CCCCCCCCCEECEEHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
GMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY
CHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCEEEECCCCC
PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQL
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEECCCHHHHHHHHHHHH
LSTGHEPHTRPLVTFGETSAATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRA
HHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
AVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIVQDEMQPFTTGENSTIRARDI
HHCCEEECCHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEE
HYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE
EEECCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCC
SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLA
HHHHHHHHHHHHHCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHCCCEEE
IYPVTGWWRTRKALNRWHSRARYALVVSIRTPEELVDIYTPVAAEIGIAV
EEECCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure 
AERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIIS
CCCCCHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GQQTLGRDAEFTGVYLTFESDPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGK
CHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCC
IGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIRLAALEALWTDSPDLFPRDET
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL
CEEEEEEEECCCCCHHHHHHEEEHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHH
GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH
PFLDAHDKHACHPDWGTHDHDRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVL
HHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHEEECCCHHHHHHHCCCCCCHHHCCEEEEE
PPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTTDSRDRGRPSSWSAQLDKLAS
CCCCCCCCCEECEEHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
GMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY
CHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCEEEECCCCC
PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQL
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEECCCHHHHHHHHHHHH
LSTGHEPHTRPLVTFGETSAATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRA
HHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
AVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIVQDEMQPFTTGENSTIRARDI
HHCCEEECCHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEE
HYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE
EEECCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCC
SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLA
HHHHHHHHHHHHHCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHCCCEEE
IYPVTGWWRTRKALNRWHSRARYALVVSIRTPEELVDIYTPVAAEIGIAV
EEECCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA