| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317711
Identifier: 74317711
GI number: 74317711
Start: 1782860
End: 1785352
Strand: Direct
Name: 74317711
Synonym: Tbd_1693
Alternate gene names: NA
Gene position: 1782860-1785352 (Clockwise)
Preceding gene: 74317710
Following gene: 74317714
Centisome position: 61.27
GC content: 60.77
Gene sequence:
>2493_bases ATGGCAGAACGTCTGCCCCACCTGATCTTCAACAGCACAGCAATAACAAAGCAGTACCAACGACCCAGCCGCAAGATTGA CATCGAATTCCCCCTTAAGGAGCGAGACCGCCAGCAGCACGGCGCACAACTTCTGGAAGCTTTGCGCCAAGCCAAAACTC AGGAACCCGGCATCATCTCGGGACAGCAGACATTGGGCCGCGATGCCGAATTCACTGGCGTGTACCTAACTTTCGAAAGC GACCCTGGTTTTGAACTGGCCTTCGAAAGCTTGGGCTTCGCCCCGAGCAGAATCGAACTACTGGTGGTCAAGCAGGAAGG CGAACGAATGCTAGCCACCGTTTTCGTACCGGAAGGCAAAATCGGCTACTTCATCCGTCGGGTGGAGGCTTATCTAAATG AGGGTAAGGACAAACCCAACAAGAAGGGCGAACTCCGGCCCCAATACAAAAAACTGGTGGAAAGCATCGCCTCCATCCGT TTGGCCGCGTTGGAAGCTCTCTGGACCGACAGCCCCGATCTGTTCCCGCGCGATGAAACGCCGATCTGGTGGGAAGTCTG GCTGCGCATCGGGGACGGTTTCGATGAAGTCGGTTTCTTCCGCACCCACGCCGCACAACTGAATTTAGAAGTGGCCGATG ACGAAGTGCGTTTTCTCGAACGCTGTGTAGTCCTGGTGCGTGGCAGCCGCAGTCAACTCGCCCGTTCCCTGCAACTTTTG GGTGGCATGGCTGAACTGCGCAAAGCGAAACAGAATGCCGAGCACTACACGACCATGAATGCTGTGCAACAGCACGCTGC CGTTGCTGTCGCCGCGCAGTATCTTCAGACACCAGGGCCGGATGCCCCTGCTGTCTGCATATTGGACACTGGCGTCAGTC AGGATCACCCGCTGCTGGCCCCCTTCCTTGATGCCCATGACAAACATGCCTGCCACCCGGATTGGGGAACCCATGATCAT GATCGGTTGGGCCACGGCACCGCCATGGCCGGTCTCGCTTTGCACGGCGATCTGAGCGAAACCTTGGCCCAGCAGCCTTT TCCTTCTCCGAGTCACCGCTTGGAGTCGGTCAAAGTCTTGCCGCCCACCGGCGACAACCCACCTCATCTTTACGGCTATC GGTATAGCCAAGCGATGGACCGCGTGACGATTACCGCACCCCACCGCCGCCGCACCTTCTGTTCTGCCGTGACTACCACC GACTCCCGCGACCGAGGTCGACCCTCATCTTGGTCAGCGCAGTTGGACAAGCTGGCAAGCGGCATGGAAGACGGTACGCA ACGCCTGATCTTCCAGACTGCCGGTAACGCCGAGCATTCCAACATTACTGACTACCCCGCCAGCAACGCCCTCGACGGCA TCCACGACCCGGCCCAATCCTGGAACGTACTCACCGTCGGGGCCTACACAGGCAAGTGGCAGATTGACGAGGCAACCTAC CCGGGTCGCCAGCCCATTGCCCCGGCGGGCGCACTCGCACCTACCAGTTGCACCGCCGTGAGTTGGCCCACCAGCGGACG CCAGAAATGGCCCAACAAACCGGACGTCGTATTGGAAGGCGGCAATTGGGCGCTGGACCCCGCTTTCAACTTCGCCGAAG ACCTAGACAGCCTGCAACTCCTCAGTACCGGGCACGAACCACACACTAGGCCGCTGGTCACTTTCGGCGAGACCAGCGCC GCCACCGCCCTGGCCGCCCGCATGGCGGCTGTATTGCAAAGCCACTACCCCGACCTCTGGCCTGAAACCTTGCGCGCCCT GCTGGTCCACTCGTCGCAATGGACGTCGGCCATGAGGGCGGCGGTTGGCAACCTTCAGGTCAAGGGCAACGTTCGCCAGT TGCTTCGTACCTGCGGCTTCGGCGTGCCGCAACTCGACGACGCCCTATGGAGCGCAAAACACGCCCTGACGCTGATCGTA CAGGACGAGATGCAACCCTTCACTACTGGAGAGAACAGCACGATCCGCGCTCGCGACATCCACTACCACGCCCTGCCCTG GCCGGCAGAGGCGCTGCGGGCGTTGCCACTGGGTACGCAGGTCGAGATGCGCGTCACCCTGTCCTACTTCATCCAGCCCA ATCCCGGCCAACGCGGTTGGAGCGGAAAATTCAGCTATGCCTCCCACGGCCTGCGCTTCCGAGTAAAAGCGCCGGGGGAA AGCCACGAAGCCTTCGAACAACGCATAAATCAGGCCGCCCGCGACGAGGAATACGAACGCACTGGCGTCAGCGACAGTGA TTTCTGGGTAGTCGGCTCCGACACCCGCGAACTCGGCTCATTGCATTCCGACCTCTGGCAAGGCACGTCCGAGCAACTCG CCGATTGCGGCTACCTCGCCATCTACCCCGTCACCGGCTGGTGGCGCACCCGCAAAGCCCTGAACCGCTGGCACTCCCGC GCCCGCTACGCCCTTGTGGTCAGCATCCGCACTCCCGAGGAGTTGGTGGATATCTACACGCCAGTGGCGGCGGAAATTGG CATCGCGGTCTGA
Upstream 100 bases:
>100_bases TCCTCCATGACCGCCCGATGTTGGAAACGGCGGACATCCGCGCCACCCTGGAAGAAAGAAAAGCAACCCACGACCGATAA CCCACCGACCGGAGGAGGCT
Downstream 100 bases:
>100_bases ATGAACAGGGTAAGCCATGCGCGCCGACCCACCGCTCAAAGCGACAGGTATGCGCTGATTCCCGCCGTTTCGCAGCATCA AGCGAGAATGACCGAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 830; Mature: 829
Protein sequence:
>830_residues MAERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIISGQQTLGRDAEFTGVYLTFES DPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGKIGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIR LAALEALWTDSPDLFPRDETPIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLAPFLDAHDKHACHPDWGTHDH DRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVLPPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTT DSRDRGRPSSWSAQLDKLASGMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQLLSTGHEPHTRPLVTFGETSA ATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRAAVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIV QDEMQPFTTGENSTIRARDIHYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLAIYPVTGWWRTRKALNRWHSR ARYALVVSIRTPEELVDIYTPVAAEIGIAV
Sequences:
>Translated_830_residues MAERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIISGQQTLGRDAEFTGVYLTFES DPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGKIGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIR LAALEALWTDSPDLFPRDETPIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLAPFLDAHDKHACHPDWGTHDH DRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVLPPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTT DSRDRGRPSSWSAQLDKLASGMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQLLSTGHEPHTRPLVTFGETSA ATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRAAVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIV QDEMQPFTTGENSTIRARDIHYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLAIYPVTGWWRTRKALNRWHSR ARYALVVSIRTPEELVDIYTPVAAEIGIAV >Mature_829_residues AERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIISGQQTLGRDAEFTGVYLTFESD PGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGKIGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIRL AALEALWTDSPDLFPRDETPIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLLG GMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLAPFLDAHDKHACHPDWGTHDHD RLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVLPPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTTD SRDRGRPSSWSAQLDKLASGMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATYP GRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQLLSTGHEPHTRPLVTFGETSAA TALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRAAVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIVQ DEMQPFTTGENSTIRARDIHYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGES HEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLAIYPVTGWWRTRKALNRWHSRA RYALVVSIRTPEELVDIYTPVAAEIGIAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92292; Mature: 92161
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIIS CCCCCCHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQQTLGRDAEFTGVYLTFESDPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGK CHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCC IGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIRLAALEALWTDSPDLFPRDET HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL CEEEEEEEECCCCCHHHHHHEEEHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHH GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH PFLDAHDKHACHPDWGTHDHDRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVL HHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHEEECCCHHHHHHHCCCCCCHHHCCEEEEE PPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTTDSRDRGRPSSWSAQLDKLAS CCCCCCCCCEECEEHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC GMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY CHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCEEEECCCCC PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQL CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEECCCHHHHHHHHHHHH LSTGHEPHTRPLVTFGETSAATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRA HHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH AVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIVQDEMQPFTTGENSTIRARDI HHCCEEECCHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEE HYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE EEECCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCC SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLA HHHHHHHHHHHHHCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHCCCEEE IYPVTGWWRTRKALNRWHSRARYALVVSIRTPEELVDIYTPVAAEIGIAV EEECCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCHHHHCCCCC >Mature Secondary Structure AERLPHLIFNSTAITKQYQRPSRKIDIEFPLKERDRQQHGAQLLEALRQAKTQEPGIIS CCCCCHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQQTLGRDAEFTGVYLTFESDPGFELAFESLGFAPSRIELLVVKQEGERMLATVFVPEGK CHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCC IGYFIRRVEAYLNEGKDKPNKKGELRPQYKKLVESIASIRLAALEALWTDSPDLFPRDET HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PIWWEVWLRIGDGFDEVGFFRTHAAQLNLEVADDEVRFLERCVVLVRGSRSQLARSLQLL CEEEEEEEECCCCCHHHHHHEEEHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHH GGMAELRKAKQNAEHYTTMNAVQQHAAVAVAAQYLQTPGPDAPAVCILDTGVSQDHPLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH PFLDAHDKHACHPDWGTHDHDRLGHGTAMAGLALHGDLSETLAQQPFPSPSHRLESVKVL HHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHEEECCCHHHHHHHCCCCCCHHHCCEEEEE PPTGDNPPHLYGYRYSQAMDRVTITAPHRRRTFCSAVTTTDSRDRGRPSSWSAQLDKLAS CCCCCCCCCEECEEHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC GMEDGTQRLIFQTAGNAEHSNITDYPASNALDGIHDPAQSWNVLTVGAYTGKWQIDEATY CHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCEEEECCCCC PGRQPIAPAGALAPTSCTAVSWPTSGRQKWPNKPDVVLEGGNWALDPAFNFAEDLDSLQL CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEECCCHHHHHHHHHHHH LSTGHEPHTRPLVTFGETSAATALAARMAAVLQSHYPDLWPETLRALLVHSSQWTSAMRA HHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH AVGNLQVKGNVRQLLRTCGFGVPQLDDALWSAKHALTLIVQDEMQPFTTGENSTIRARDI HHCCEEECCHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEE HYHALPWPAEALRALPLGTQVEMRVTLSYFIQPNPGQRGWSGKFSYASHGLRFRVKAPGE EEECCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCC SHEAFEQRINQAARDEEYERTGVSDSDFWVVGSDTRELGSLHSDLWQGTSEQLADCGYLA HHHHHHHHHHHHHCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHCCCEEE IYPVTGWWRTRKALNRWHSRARYALVVSIRTPEELVDIYTPVAAEIGIAV EEECCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA