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The map label for this gene is dppB [H]

Identifier: 74317688

GI number: 74317688

Start: 1754738

End: 1755715

Strand: Reverse

Name: dppB [H]

Synonym: Tbd_1670

Alternate gene names: 74317688

Gene position: 1755715-1754738 (Counterclockwise)

Preceding gene: 74317689

Following gene: 74317687

Centisome position: 60.34

GC content: 61.96

Gene sequence:

>978_bases
ATGCTCGGCTACATCCTGCGCCGTCTCTTCTATGCCGTCCCGATCCTGATCGGCGTCAACCTGCTCACCTTCGCCTTGTT
CTTCGTCGTCAACACGCCCGACGACATGGCACGCCTGCAACTGGGCGCGAAGCACGTGACGCCCGAGGCGATCGCGCGCT
GGAAGGCCGAGCACGGCTACGACAAGCCGCTCTTGCTCAACGCCGAGGCCGAGGGCAGCGCGCGCTTCACCGACACGATC
TTCTTCCGCCATTCGGCGGCGATGTTCGTATTCGAATTCGGCAAGGGCGACGACGGCCGCGACATCGCGCACGAGATCAA
GACGCGCATGGGGCCGAGTCTCGCGATCGCGCTGCCCGTGTTCGTCATCGGGCTGCTGGTCAATGTCAGCTTCGCGCTCC
TGATGGTGTTCTTTCGCACGACCTACCTCGATTTATGGGGGGTCGTGCTCTGCGTCGTGCTGATGTCGATCTCGGGACTG
TTCTACATCATCGCCGGCCAGTATTTCATCGCGAAGCTGTGGAACCTGCTGCCGATATCGGGCTTCGCCGGTGGCATCGA
TGCGTTCAAGTTCATCCTGCTTCCGGTCCTCGTCAGCGTCGTCGCAGGTATCGGCAGCGGTGCGCGCTGGTATCGCACGA
TCTTTCTCGAGGAAATCGGCAAGGACTACGCGCGTACCGCGCGTGCCAAGGGCCTAGGCGAAGGGCGCGTGCTGTTCCGC
CACGTCCTCAAGAACGGCATGATCCCGATTCTTACCGGCGCAGTCGTCGTGCTGCCCTTGCTCTTCATGGGCAGCCTCAT
CACCGAATCCTTCTTCGGGATTCCGGGGCTCGGGAGTTACACGATCGACGCGATCCAGGCGCAGGATTTCGCGGTCGTGC
GCGCGATGGTCTTCCTCGGTTCCTTCCTCTACATCGTCGGCCTGATTCTTACCGACATCTCCTACTCGTGGGTCGATCCG
AGGGTGCGGCTGCAATGA

Upstream 100 bases:

>100_bases
GGCCGGTGCTGTGGCCTGTCGCCTTGCTCGTGGTCGGGCTCGTCGTGCTGATCGCGCCCGCGGCGAGCGCGTGGCGGCGG
CATGAGCGGAAGGTCGCCTG

Downstream 100 bases:

>100_bases
CGATCCAGCCGGTGATCCTGTGGACCGACGCGCTGGTCTTCCTGTTGGTCGCCGCCTTGCTGGGGCTGGCGTGGTTCATC
CGGCGCCGACCGCATCTGCG

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLGYILRRLFYAVPILIGVNLLTFALFFVVNTPDDMARLQLGAKHVTPEAIARWKAEHGYDKPLLLNAEAEGSARFTDTI
FFRHSAAMFVFEFGKGDDGRDIAHEIKTRMGPSLAIALPVFVIGLLVNVSFALLMVFFRTTYLDLWGVVLCVVLMSISGL
FYIIAGQYFIAKLWNLLPISGFAGGIDAFKFILLPVLVSVVAGIGSGARWYRTIFLEEIGKDYARTARAKGLGEGRVLFR
HVLKNGMIPILTGAVVVLPLLFMGSLITESFFGIPGLGSYTIDAIQAQDFAVVRAMVFLGSFLYIVGLILTDISYSWVDP
RVRLQ

Sequences:

>Translated_325_residues
MLGYILRRLFYAVPILIGVNLLTFALFFVVNTPDDMARLQLGAKHVTPEAIARWKAEHGYDKPLLLNAEAEGSARFTDTI
FFRHSAAMFVFEFGKGDDGRDIAHEIKTRMGPSLAIALPVFVIGLLVNVSFALLMVFFRTTYLDLWGVVLCVVLMSISGL
FYIIAGQYFIAKLWNLLPISGFAGGIDAFKFILLPVLVSVVAGIGSGARWYRTIFLEEIGKDYARTARAKGLGEGRVLFR
HVLKNGMIPILTGAVVVLPLLFMGSLITESFFGIPGLGSYTIDAIQAQDFAVVRAMVFLGSFLYIVGLILTDISYSWVDP
RVRLQ
>Mature_325_residues
MLGYILRRLFYAVPILIGVNLLTFALFFVVNTPDDMARLQLGAKHVTPEAIARWKAEHGYDKPLLLNAEAEGSARFTDTI
FFRHSAAMFVFEFGKGDDGRDIAHEIKTRMGPSLAIALPVFVIGLLVNVSFALLMVFFRTTYLDLWGVVLCVVLMSISGL
FYIIAGQYFIAKLWNLLPISGFAGGIDAFKFILLPVLVSVVAGIGSGARWYRTIFLEEIGKDYARTARAKGLGEGRVLFR
HVLKNGMIPILTGAVVVLPLLFMGSLITESFFGIPGLGSYTIDAIQAQDFAVVRAMVFLGSFLYIVGLILTDISYSWVDP
RVRLQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=351, Percent_Identity=29.0598290598291, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787053, Length=335, Percent_Identity=28.0597014925373, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1788504, Length=317, Percent_Identity=25.5520504731861, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787497, Length=325, Percent_Identity=25.2307692307692, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789888, Length=327, Percent_Identity=22.9357798165138, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787761, Length=348, Percent_Identity=26.4367816091954, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1787550, Length=285, Percent_Identity=23.5087719298246, Blast_Score=78, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35918; Mature: 35918

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYILRRLFYAVPILIGVNLLTFALFFVVNTPDDMARLQLGAKHVTPEAIARWKAEHGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC
DKPLLLNAEAEGSARFTDTIFFRHSAAMFVFEFGKGDDGRDIAHEIKTRMGPSLAIALPV
CCCEEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHH
FVIGLLVNVSFALLMVFFRTTYLDLWGVVLCVVLMSISGLFYIIAGQYFIAKLWNLLPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFAGGIDAFKFILLPVLVSVVAGIGSGARWYRTIFLEEIGKDYARTARAKGLGEGRVLFR
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HVLKNGMIPILTGAVVVLPLLFMGSLITESFFGIPGLGSYTIDAIQAQDFAVVRAMVFLG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SFLYIVGLILTDISYSWVDPRVRLQ
HHHHHHHHHHHHCCCHHCCCCEECC
>Mature Secondary Structure
MLGYILRRLFYAVPILIGVNLLTFALFFVVNTPDDMARLQLGAKHVTPEAIARWKAEHGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC
DKPLLLNAEAEGSARFTDTIFFRHSAAMFVFEFGKGDDGRDIAHEIKTRMGPSLAIALPV
CCCEEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHH
FVIGLLVNVSFALLMVFFRTTYLDLWGVVLCVVLMSISGLFYIIAGQYFIAKLWNLLPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFAGGIDAFKFILLPVLVSVVAGIGSGARWYRTIFLEEIGKDYARTARAKGLGEGRVLFR
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HVLKNGMIPILTGAVVVLPLLFMGSLITESFFGIPGLGSYTIDAIQAQDFAVVRAMVFLG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SFLYIVGLILTDISYSWVDPRVRLQ
HHHHHHHHHHHHCCCHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]