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The map label for this gene is yafS [H]

Identifier: 74317682

GI number: 74317682

Start: 1747939

End: 1748676

Strand: Reverse

Name: yafS [H]

Synonym: Tbd_1664

Alternate gene names: 74317682

Gene position: 1748676-1747939 (Counterclockwise)

Preceding gene: 74317685

Following gene: 74317681

Centisome position: 60.1

GC content: 64.5

Gene sequence:

>738_bases
ATGTTATCCAAGCTGAACGCCGGATGGTTCGACACGCCGTTGGGACAGCATCTGCTCTTCCGCGAGCAGCGCTACTTCGA
CGACGCCGTCTCGGACGTATTCGGCTTCCACGCAGTTCAAGTCGGCCTGCCGAACATCGATTTCCTGCGCAACAGCCGCA
TTCCGCTACGTGTGAACTGCGCGGTCGAGCCGCCGAGCCAGGTCCGCGCCGACCCGATGTTCCTGCCGTTCCAGAGCCAG
TCGCTCGATCTGCTGCTGTTGCCGCATGTCCTCGAATTCAGCGCGAACCCCCATCAGGTCCTGCGCGAAGCCGAACGAGT
GCTGCGCCCCGAAGGTCGCCTCGTGCTGGCCGGCTTCAACCCGCGCAGCCTGTGGGGGCTCGCCCGCATCGCCCAGGGCG
GCGAGCGTGGCTACCCGTGGAACGGCAACTTTCTCAACATCTCGCGCGTCAAGGACTGGATGGTTCTGCTCGGCCTCGAG
GTGGCGGGCGGCAGCATGTGCTGCTATCGTCCACCGATCAACCGCGAAAACTGGCTGCGTCGGCTTCGCTTCATGGAGCC
GGCCGGCGACCGCTGGTGGGCGATGGGAGGCGGGGTCTATTTCCTGCAGGCCGTCAAGCGCGTCGTCGGAATGAACATCA
TCCAGCCGCAGTGGTCGACGCCCGTGGCACGGCGCCTGCTCTCGCCCGCGGCCAAGGTGATCAATCTCAAACACTACCGA
ATACATCGTGACCGCTGA

Upstream 100 bases:

>100_bases
CGTATTTCGCGTCGTGCCACACCCAGATGTAGTTGTCCTCGAACGCGGGCAGGGGAATCAGCGTCAACATGATGGACTGC
AAGAGACAGGAGGAAGGGCT

Downstream 100 bases:

>100_bases
CATCATTTATATATATAGCGACGGTGCCTGCAAGGGCAATCCCGGCGCAGGCGGCTGGGGCGCGCTTCTCGTCGCGGGCG
GCCACCGCAAGGAGATAAGC

Product: methyl-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLSKLNAGWFDTPLGQHLLFREQRYFDDAVSDVFGFHAVQVGLPNIDFLRNSRIPLRVNCAVEPPSQVRADPMFLPFQSQ
SLDLLLLPHVLEFSANPHQVLREAERVLRPEGRLVLAGFNPRSLWGLARIAQGGERGYPWNGNFLNISRVKDWMVLLGLE
VAGGSMCCYRPPINRENWLRRLRFMEPAGDRWWAMGGGVYFLQAVKRVVGMNIIQPQWSTPVARRLLSPAAKVINLKHYR
IHRDR

Sequences:

>Translated_245_residues
MLSKLNAGWFDTPLGQHLLFREQRYFDDAVSDVFGFHAVQVGLPNIDFLRNSRIPLRVNCAVEPPSQVRADPMFLPFQSQ
SLDLLLLPHVLEFSANPHQVLREAERVLRPEGRLVLAGFNPRSLWGLARIAQGGERGYPWNGNFLNISRVKDWMVLLGLE
VAGGSMCCYRPPINRENWLRRLRFMEPAGDRWWAMGGGVYFLQAVKRVVGMNIIQPQWSTPVARRLLSPAAKVINLKHYR
IHRDR
>Mature_245_residues
MLSKLNAGWFDTPLGQHLLFREQRYFDDAVSDVFGFHAVQVGLPNIDFLRNSRIPLRVNCAVEPPSQVRADPMFLPFQSQ
SLDLLLLPHVLEFSANPHQVLREAERVLRPEGRLVLAGFNPRSLWGLARIAQGGERGYPWNGNFLNISRVKDWMVLLGLE
VAGGSMCCYRPPINRENWLRRLRFMEPAGDRWWAMGGGVYFLQAVKRVVGMNIIQPQWSTPVARRLLSPAAKVINLKHYR
IHRDR

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=161, Percent_Identity=35.4037267080745, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28121; Mature: 28121

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKLNAGWFDTPLGQHLLFREQRYFDDAVSDVFGFHAVQVGLPNIDFLRNSRIPLRVNC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCEEEEE
AVEPPSQVRADPMFLPFQSQSLDLLLLPHVLEFSANPHQVLREAERVLRPEGRLVLAGFN
EECCHHHHCCCCEEECCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECC
PRSLWGLARIAQGGERGYPWNGNFLNISRVKDWMVLLGLEVAGGSMCCYRPPINRENWLR
HHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHEEEEECCCCEEEECCCCCHHHHHH
RLRFMEPAGDRWWAMGGGVYFLQAVKRVVGMNIIQPQWSTPVARRLLSPAAKVINLKHYR
HHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCHHEE
IHRDR
EECCC
>Mature Secondary Structure
MLSKLNAGWFDTPLGQHLLFREQRYFDDAVSDVFGFHAVQVGLPNIDFLRNSRIPLRVNC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCEEEEE
AVEPPSQVRADPMFLPFQSQSLDLLLLPHVLEFSANPHQVLREAERVLRPEGRLVLAGFN
EECCHHHHCCCCEEECCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECC
PRSLWGLARIAQGGERGYPWNGNFLNISRVKDWMVLLGLEVAGGSMCCYRPPINRENWLR
HHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHEEEEECCCCEEEECCCCCHHHHHH
RLRFMEPAGDRWWAMGGGVYFLQAVKRVVGMNIIQPQWSTPVARRLLSPAAKVINLKHYR
HHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCHHEE
IHRDR
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]