Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317671

Identifier: 74317671

GI number: 74317671

Start: 1736433

End: 1737194

Strand: Reverse

Name: 74317671

Synonym: Tbd_1653

Alternate gene names: NA

Gene position: 1737194-1736433 (Counterclockwise)

Preceding gene: 74317672

Following gene: 74317670

Centisome position: 59.7

GC content: 70.21

Gene sequence:

>762_bases
ATGAACGAAAACGTGCGTGAAGACGAACTTCATGCCTATGTGGACGGCGCGCTGGACGAGGCGCGCCGTCTCGAGGTCGA
GGCGTGGCTTGCCGCGCATCCGGCCGACGCGGCGCGGGTCGCGGCATGGACCGCGCAGAGCAGGATGATGCACGACGCAT
TCGACTCCGTGCTCAACGAGCCCCTGCCGCTGAACCTGGTGCGTGCCACGCGGCGGCCGGCGTTCGCTGCGCCTGCCCGC
GCCGTGGCCGCGTCGCTGGCCCTGCTCGCAGCCGGCCTCGTCGGCTACGCATTCGGTGTGGCCGGCCAAGGCCAGCCGAC
CCGGGCGCCGGCGTATCTGGCCCGCGACGCGGCCATCGCCCACGCCGTGTTCAGCCCGGAAACGCGCCATCCGGTGGAAG
TCGACGCTGCGCAGGGCGCGCATCTGGTCGCGTGGCTATCCAAGCGGGTCGGAACGCCCCTGCAGGCGCCGGACTTCAGC
GCGCAAGGTTTCAGTCTGCTCGGCGGACGGCTGCTCTCGGGCGACACCGGGCCCGTCGCGCAGTTCATGTACGAGGACGG
TCTGGGACGCCGGGTGACCCTGTATGTGCGCCGCGCGGCCGCTGACGCCCCCGGGCCTACGGCCTTCCGTCATGCCGTCG
AAAAAGGCGTCGACGTGTTCTACTGGATCGACGGCGAGTTCGGTTATGCGCTGTCAGGCCAGATCGGCCGTCAGACCATG
CAGCGTCTGGCGGTTGCGGCCTACGGGCAGTTGACCCCCTGA

Upstream 100 bases:

>100_bases
GGGTGCCGACCGGTACCGTGATGTCACGTCTGGCGCGGGCGCGCGAACGCATGCGCCGGATGCTCACGGGCGAACCCGTC
GTCAATCTGAAAGCCGTGAA

Downstream 100 bases:

>100_bases
GCCACCGCGCCTCAGTATCCGCGGGCGAGAGCTTTCCTGTTGTCCGCACCGCTTTCCGCCGCAGCGCGTCGCAACGGTCC
GGTGATTCGATCGCAGCCGG

Product: transmembrane transcriptional regulator (anti-sigma factor)

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Sigma Factor Regulator PrtR; Transmembrane Regulator PrtR; Transmembrane Transcription Regulator

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNEPLPLNLVRATRRPAFAAPAR
AVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFS
AQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM
QRLAVAAYGQLTP

Sequences:

>Translated_253_residues
MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNEPLPLNLVRATRRPAFAAPAR
AVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFS
AQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM
QRLAVAAYGQLTP
>Mature_253_residues
MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNEPLPLNLVRATRRPAFAAPAR
AVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFS
AQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM
QRLAVAAYGQLTP

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27030; Mature: 27030

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PLPLNLVRATRRPAFAAPARAVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIA
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
HAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFSAQGFSLLGGRLLSGDTGPVA
HHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEECCCCCHHH
QFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM
HHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCEEECCHHHHHHH
QRLAVAAYGQLTP
HHHHHHHHCCCCC
>Mature Secondary Structure
MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PLPLNLVRATRRPAFAAPARAVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIA
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
HAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFSAQGFSLLGGRLLSGDTGPVA
HHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEECCCCCHHH
QFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM
HHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCEEECCHHHHHHH
QRLAVAAYGQLTP
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA