| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is flgL [H]
Identifier: 74317645
GI number: 74317645
Start: 1712910
End: 1713812
Strand: Reverse
Name: flgL [H]
Synonym: Tbd_1627
Alternate gene names: 74317645
Gene position: 1713812-1712910 (Counterclockwise)
Preceding gene: 74317646
Following gene: 74317644
Centisome position: 58.9
GC content: 64.45
Gene sequence:
>903_bases ATGCGCATCAGCACCCAAACCCTGTTCGAAGCCGGCGCCGCCCGTCTGAGCGAACTGCAGTCGGACATGGTCAAGACCCA GCAGCAGATTTCAACCGGCCGCCGCGTGCTCACGCCGGCCGACGATCCGGTCGCCGCGGCGCGTGCGCTCGAAGTCACGC AGTCGCAGTCGATGAACAGCCAGTACGGTGTCAACCGCGACTATGCGAAAAGTTCGCTCGCCGCGGTCGAAGGCTCGCTC ACGGGCGTGACCGAACTGCTCCAGGACGTGAAGACGACGATCGTCGCCGCGGGCAACGGGACGCTCGGCGACATGGAACG CGGCTACATGGCGACCGAGCTCCGGGGGCGCTTCGAGCAGTTGCTCGGAATGGCCAACAGCCGTGACGCGCAGGGCAACT ACCTGTTCTCGGGCTTTCAGACCGCGACCCCGCCCTTCAGCAAAAATGCGGGCAATGCCGTCACCTACAACGGCGACGCC GGGCAACGGCTGATGCAGGTCGACACGACCCGCCAGCTCGCCGTGTCGCACTCCGGGCAGGCCATATTCCAGGGCGGCGG TCAGGATGTCTTCCAGACCTTGAACGACCTCATTGCCGTGCTCGAGACCCCCGGTACGGCAGGCCTCACCGCGGGACTCG AAACGGCCAACGGCAAGATCGACCTCGCGCTCGACAACGTGCTGACCGTGCGCGCCTCGGTCGGATCGCGTCTGCAGGAG ATCGACGCGCTCGACAGCGCAGGCGAAGACCGCCATCTCCAGTACAGCGAAATCCTCTCGGGCCTCCAGGACCTCGATTA CACGCAGGCACTCACCGAACTGTCGAAGCAGCAACTTACGCTCGAAGCCGCGCAGAAATCGTTCGTCAAGACCTCCGGCC TGTCCTTGTTCAACTTCATCTGA
Upstream 100 bases:
>100_bases GCGCTACCAGCAGGCCTATCAGGCCGCGGCCAAGGTCATGCAGGTCGCGAGCGAAATGTTCGACGCGCTGCTCACGATCG GCAGGTAAGAGGACTTCACC
Downstream 100 bases:
>100_bases AACGCCCCGTGCGCCCTCCCGATTCCCTGTCGAACGACGCGACGAAAGCCCAGCTCGTGCGGCTGCTCGCGGGCGTCTCG CTGCACGGCGACCAGCATCT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNSQYGVNRDYAKSSLAAVEGSL TGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQLLGMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDA GQRLMQVDTTRQLAVSHSGQAIFQGGGQDVFQTLNDLIAVLETPGTAGLTAGLETANGKIDLALDNVLTVRASVGSRLQE IDALDSAGEDRHLQYSEILSGLQDLDYTQALTELSKQQLTLEAAQKSFVKTSGLSLFNFI
Sequences:
>Translated_300_residues MRISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNSQYGVNRDYAKSSLAAVEGSL TGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQLLGMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDA GQRLMQVDTTRQLAVSHSGQAIFQGGGQDVFQTLNDLIAVLETPGTAGLTAGLETANGKIDLALDNVLTVRASVGSRLQE IDALDSAGEDRHLQYSEILSGLQDLDYTQALTELSKQQLTLEAAQKSFVKTSGLSLFNFI >Mature_300_residues MRISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNSQYGVNRDYAKSSLAAVEGSL TGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQLLGMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDA GQRLMQVDTTRQLAVSHSGQAIFQGGGQDVFQTLNDLIAVLETPGTAGLTAGLETANGKIDLALDNVLTVRASVGSRLQE IDALDSAGEDRHLQYSEILSGLQDLDYTQALTELSKQQLTLEAAQKSFVKTSGLSLFNFI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=317, Percent_Identity=37.2239747634069, Blast_Score=204, Evalue=5e-54,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 32027; Mature: 32027
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCC QYGVNRDYAKSSLAAVEGSLTGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQ CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCHHCCHHHHHHHHHHHH LLGMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDAGQRLMQVDTTRQLAVSHSGQ HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC AIFQGGGQDVFQTLNDLIAVLETPGTAGLTAGLETANGKIDLALDNVLTVRASVGSRLQE EEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHH IDALDSAGEDRHLQYSEILSGLQDLDYTQALTELSKQQLTLEAAQKSFVKTSGLSLFNFI HHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MRISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCC QYGVNRDYAKSSLAAVEGSLTGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQ CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCHHCCHHHHHHHHHHHH LLGMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDAGQRLMQVDTTRQLAVSHSGQ HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC AIFQGGGQDVFQTLNDLIAVLETPGTAGLTAGLETANGKIDLALDNVLTVRASVGSRLQE EEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHH IDALDSAGEDRHLQYSEILSGLQDLDYTQALTELSKQQLTLEAAQKSFVKTSGLSLFNFI HHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8158647; 8905232; 9278503; 1447789 [H]