Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317644

Identifier: 74317644

GI number: 74317644

Start: 1712338

End: 1712901

Strand: Reverse

Name: 74317644

Synonym: Tbd_1626

Alternate gene names: NA

Gene position: 1712901-1712338 (Counterclockwise)

Preceding gene: 74317645

Following gene: 74317643

Centisome position: 58.87

GC content: 66.67

Gene sequence:

>564_bases
GTGCGCCCTCCCGATTCCCTGTCGAACGACGCGACGAAAGCCCAGCTCGTGCGGCTGCTCGCGGGCGTCTCGCTGCACGG
CGACCAGCATCTCGCCGAGGTCGAGCGCGATCTGGTGCAGGTCGACGCGCTGCTCAACGAGGCGATCAAAAAGCTGTGCG
CGAGCTTCATGGCGATTCACCAGACGATCGGGCTGCAGCAGGAAGCGCTCAATGGCGTGCTCGCCTCGGGCGTAGCCGGC
CCTGAGCAGGCGGCACGGCTCGAAGCGCTGCGCGATGAAATCAGCCAGCACGTCGGCGCGGCAGTGACCGGGCTGCAGTT
CCAGGACATGACGAGCCAGCTCATCGGACGCATGGTGCAGCATCTCGCCGGGCTGCGTGACGTGTTCGGCGCGCTGGGCG
CCGACGGAAGCACGGCGTTGCCCGAGAGCGGCAGCGAAGAGATGCTGGCCTTGCTCGACAGCATCAGCGAACGGGTCGGC
GTCCACGGCACCGAACTGCCCCGCGTGACCCGGAGCAGCGTAAAACAGCGCCACATGGAAAGCGGCGACATCGACCTTTT
TTGA

Upstream 100 bases:

>100_bases
TCACCGAACTGTCGAAGCAGCAACTTACGCTCGAAGCCGCGCAGAAATCGTTCGTCAAGACCTCCGGCCTGTCCTTGTTC
AACTTCATCTGAAACGCCCC

Downstream 100 bases:

>100_bases
GCTTATGAACCGTCGCGCATGCGCGGCAAAGAACGCAGCAGGAGCAATAAGGATGAAAACAATACTTGCAGTAGACGACT
CGGGGTCGCTGCGTCAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRPPDSLSNDATKAQLVRLLAGVSLHGDQHLAEVERDLVQVDALLNEAIKKLCASFMAIHQTIGLQQEALNGVLASGVAG
PEQAARLEALRDEISQHVGAAVTGLQFQDMTSQLIGRMVQHLAGLRDVFGALGADGSTALPESGSEEMLALLDSISERVG
VHGTELPRVTRSSVKQRHMESGDIDLF

Sequences:

>Translated_187_residues
MRPPDSLSNDATKAQLVRLLAGVSLHGDQHLAEVERDLVQVDALLNEAIKKLCASFMAIHQTIGLQQEALNGVLASGVAG
PEQAARLEALRDEISQHVGAAVTGLQFQDMTSQLIGRMVQHLAGLRDVFGALGADGSTALPESGSEEMLALLDSISERVG
VHGTELPRVTRSSVKQRHMESGDIDLF
>Mature_187_residues
MRPPDSLSNDATKAQLVRLLAGVSLHGDQHLAEVERDLVQVDALLNEAIKKLCASFMAIHQTIGLQQEALNGVLASGVAG
PEQAARLEALRDEISQHVGAAVTGLQFQDMTSQLIGRMVQHLAGLRDVFGALGADGSTALPESGSEEMLALLDSISERVG
VHGTELPRVTRSSVKQRHMESGDIDLF

Specific function: Unknown

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19939; Mature: 19939

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPDSLSNDATKAQLVRLLAGVSLHGDQHLAEVERDLVQVDALLNEAIKKLCASFMAIH
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTIGLQQEALNGVLASGVAGPEQAARLEALRDEISQHVGAAVTGLQFQDMTSQLIGRMVQ
HHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HLAGLRDVFGALGADGSTALPESGSEEMLALLDSISERVGVHGTELPRVTRSSVKQRHME
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
SGDIDLF
CCCCCCC
>Mature Secondary Structure
MRPPDSLSNDATKAQLVRLLAGVSLHGDQHLAEVERDLVQVDALLNEAIKKLCASFMAIH
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTIGLQQEALNGVLASGVAGPEQAARLEALRDEISQHVGAAVTGLQFQDMTSQLIGRMVQ
HHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HLAGLRDVFGALGADGSTALPESGSEEMLALLDSISERVGVHGTELPRVTRSSVKQRHME
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
SGDIDLF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA