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The map label for this gene is yedQ [H]

Identifier: 74317607

GI number: 74317607

Start: 1674329

End: 1675945

Strand: Direct

Name: yedQ [H]

Synonym: Tbd_1589

Alternate gene names: 74317607

Gene position: 1674329-1675945 (Clockwise)

Preceding gene: 74317606

Following gene: 74317608

Centisome position: 57.54

GC content: 65.86

Gene sequence:

>1617_bases
ATGCGCAGCATGGAGCAGGTCCCGACCGGGGCGCCTAAAATGGCCGAACCGACAGAAAAACTCAACCTTCCCGATCCGAC
CGAGGTCGCGCGTGAAACGCTGCGCCGCTTGGCCATGCGACGGATCGCGCCGACGCCCGACAATTACCAGACCCTCTACG
AGGAGATCGTCGGGCCGACCGCGAGCGCCGCAGCGGCGGGTACCGCGACAGCGACGAGCGTGCTCGCCGGCCTGGCCATG
GACCTCACGCTGCATCACCCGGCCTTGGCGGCTTCGGCCGAGGCGCTGAAGCAGGCGCTGCGCGCGAGCGACTGGGCGCA
ATGCCGAAAGCAGGTCGGGCAGATCGTCCTGCAGCTGAAGCCGGGCGGGGGAAGCGGCCCGGGCCAGATCGACACCCTGG
GCCTGTTGCGCGAGCTGCTCGTCAAGACGCTCGAATTCGGCGTCGCGACGCAGCTTTCACACAACCCGACGCTCTTCGAG
AAGACGCAGCGGCTGGCGGCAGCGGTTCGCGAGGCGAACAGCATCGCCGGCCTGCGCGAGGCCGCGTCCGGCCTGAAAAG
CATGTGGATCGACGTCGACCTGCATGTCTCGCATACGCACGACCAGCAGGAGACGCTCAGACGCCTCCTCCTGCTGCTGG
TGGAAAACATCGGCGAACTGCTCGACGACGACACCTGGCTGCGCGGCCAGCTCGACGTCGTTCAGACCGTGATCACAGGA
CCGCTCAAGATCCAGGCGCTGCTCGAGGCGGAAAAACGCCTCAAGGAGGTCATCTACAAGCAGAGCCTGGTCAAGCACGG
CCTGCGCGAGGCGACCGCGACGCTCAAGGCGACGATGACGAGCTTCGTCAGCCACATGAGCGACGCGGTCGCGGCGAATG
ACGACTACCAGCAGACCATCGCCGCGCACATCGAACGGATCAGCCGCACCGAAGACGTGCTCGAGCTGAACCGCATTCTT
GAAAATCTGCTCGACGAAACGCGCAGCGCCCAGTCCGACAGCCGCCGCGTCCACGCCCAGATGATCGAGGAACGCGACGC
CGCCCAGCATGCCGCCAATCACATCAAGCAGCTCGAACTGGAACTCGCCCAGATGAGCGCCCTGGTGCGCGAGGACCCGA
TGACGCACAGCCTCAACCGGCGCGGGCTCGACGACGAGTTCGCCCGGGAGGCATCGCGCGCCGAGCGATTTAACACGCCT
TTCAGCATCGCCGTGCTCGACGTCGACAACTTCAAGGCACTCAACGACCGGCGCGGCCACAACACCGGCGACGAGGCGCT
GATCCATCTGGTCAAGGTCGCCAAGGAAGAGCTGCGCCTGAGCGACCACATTGCACGCATCGGCGGCGAAGAATTCCTGA
TCATCCTGCCCAATACCCCCGTCGCCGAGGCCGTACAGATCGTCACCCGCCTGCAACGCAGCCTGACCAAGAAATATTTC
CTCGACAACAACGAGCGCGTGCTGATCACCTTCAGCGCCGGCGTCGCCGAACGTCGCGCCGGCGAGACCCAGGAAGCCCT
CATTGCGCGCGCCGACAGCGCCATGTACGAAGCCAAGCACAGCGGCAAGAACCGCGTCTGCGTCGCGCCGGACGCGCTGC
CGCAGGCTGCCGGATGA

Upstream 100 bases:

>100_bases
CCGTTCTGCCGGCTCGCCGCGCCCGAGACCCGGCGTCCACGGAAATACCCGGCTTTTACCGCCCTAATCGGCGCTTAAGC
GTACGCCTTCGGGTCTTACC

Downstream 100 bases:

>100_bases
CGATATGCAGATTTTTGAGTTGACAGCCTTAACTTTCTCCGACCCCCGACGATTCCTCACACAACGGCGGTTCACACAGC
CCCAGCGGGCAGACCAACGT

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MRSMEQVPTGAPKMAEPTEKLNLPDPTEVARETLRRLAMRRIAPTPDNYQTLYEEIVGPTASAAAAGTATATSVLAGLAM
DLTLHHPALAASAEALKQALRASDWAQCRKQVGQIVLQLKPGGGSGPGQIDTLGLLRELLVKTLEFGVATQLSHNPTLFE
KTQRLAAAVREANSIAGLREAASGLKSMWIDVDLHVSHTHDQQETLRRLLLLLVENIGELLDDDTWLRGQLDVVQTVITG
PLKIQALLEAEKRLKEVIYKQSLVKHGLREATATLKATMTSFVSHMSDAVAANDDYQQTIAAHIERISRTEDVLELNRIL
ENLLDETRSAQSDSRRVHAQMIEERDAAQHAANHIKQLELELAQMSALVREDPMTHSLNRRGLDDEFAREASRAERFNTP
FSIAVLDVDNFKALNDRRGHNTGDEALIHLVKVAKEELRLSDHIARIGGEEFLIILPNTPVAEAVQIVTRLQRSLTKKYF
LDNNERVLITFSAGVAERRAGETQEALIARADSAMYEAKHSGKNRVCVAPDALPQAAG

Sequences:

>Translated_538_residues
MRSMEQVPTGAPKMAEPTEKLNLPDPTEVARETLRRLAMRRIAPTPDNYQTLYEEIVGPTASAAAAGTATATSVLAGLAM
DLTLHHPALAASAEALKQALRASDWAQCRKQVGQIVLQLKPGGGSGPGQIDTLGLLRELLVKTLEFGVATQLSHNPTLFE
KTQRLAAAVREANSIAGLREAASGLKSMWIDVDLHVSHTHDQQETLRRLLLLLVENIGELLDDDTWLRGQLDVVQTVITG
PLKIQALLEAEKRLKEVIYKQSLVKHGLREATATLKATMTSFVSHMSDAVAANDDYQQTIAAHIERISRTEDVLELNRIL
ENLLDETRSAQSDSRRVHAQMIEERDAAQHAANHIKQLELELAQMSALVREDPMTHSLNRRGLDDEFAREASRAERFNTP
FSIAVLDVDNFKALNDRRGHNTGDEALIHLVKVAKEELRLSDHIARIGGEEFLIILPNTPVAEAVQIVTRLQRSLTKKYF
LDNNERVLITFSAGVAERRAGETQEALIARADSAMYEAKHSGKNRVCVAPDALPQAAG
>Mature_538_residues
MRSMEQVPTGAPKMAEPTEKLNLPDPTEVARETLRRLAMRRIAPTPDNYQTLYEEIVGPTASAAAAGTATATSVLAGLAM
DLTLHHPALAASAEALKQALRASDWAQCRKQVGQIVLQLKPGGGSGPGQIDTLGLLRELLVKTLEFGVATQLSHNPTLFE
KTQRLAAAVREANSIAGLREAASGLKSMWIDVDLHVSHTHDQQETLRRLLLLLVENIGELLDDDTWLRGQLDVVQTVITG
PLKIQALLEAEKRLKEVIYKQSLVKHGLREATATLKATMTSFVSHMSDAVAANDDYQQTIAAHIERISRTEDVLELNRIL
ENLLDETRSAQSDSRRVHAQMIEERDAAQHAANHIKQLELELAQMSALVREDPMTHSLNRRGLDDEFAREASRAERFNTP
FSIAVLDVDNFKALNDRRGHNTGDEALIHLVKVAKEELRLSDHIARIGGEEFLIILPNTPVAEAVQIVTRLQRSLTKKYF
LDNNERVLITFSAGVAERRAGETQEALIARADSAMYEAKHSGKNRVCVAPDALPQAAG

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI145693134, Length=227, Percent_Identity=33.0396475770925, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1786584, Length=159, Percent_Identity=35.2201257861635, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87082007, Length=164, Percent_Identity=35.3658536585366, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787262, Length=163, Percent_Identity=33.1288343558282, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=33.1325301204819, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787816, Length=160, Percent_Identity=34.375, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788381, Length=168, Percent_Identity=31.547619047619, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87081977, Length=178, Percent_Identity=31.4606741573034, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787802, Length=202, Percent_Identity=24.2574257425743, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788956, Length=213, Percent_Identity=31.4553990610329, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787541, Length=177, Percent_Identity=31.0734463276836, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081974, Length=154, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788085, Length=178, Percent_Identity=28.6516853932584, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 59245; Mature: 59245

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMEQVPTGAPKMAEPTEKLNLPDPTEVARETLRRLAMRRIAPTPDNYQTLYEEIVGPT
CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
ASAAAAGTATATSVLAGLAMDLTLHHPALAASAEALKQALRASDWAQCRKQVGQIVLQLK
CHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEE
PGGGSGPGQIDTLGLLRELLVKTLEFGVATQLSHNPTLFEKTQRLAAAVREANSIAGLRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AASGLKSMWIDVDLHVSHTHDQQETLRRLLLLLVENIGELLDDDTWLRGQLDVVQTVITG
HHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PLKIQALLEAEKRLKEVIYKQSLVKHGLREATATLKATMTSFVSHMSDAVAANDDYQQTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AAHIERISRTEDVLELNRILENLLDETRSAQSDSRRVHAQMIEERDAAQHAANHIKQLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAQMSALVREDPMTHSLNRRGLDDEFAREASRAERFNTPFSIAVLDVDNFKALNDRRGH
HHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCC
NTGDEALIHLVKVAKEELRLSDHIARIGGEEFLIILPNTPVAEAVQIVTRLQRSLTKKYF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LDNNERVLITFSAGVAERRAGETQEALIARADSAMYEAKHSGKNRVCVAPDALPQAAG
CCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRSMEQVPTGAPKMAEPTEKLNLPDPTEVARETLRRLAMRRIAPTPDNYQTLYEEIVGPT
CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
ASAAAAGTATATSVLAGLAMDLTLHHPALAASAEALKQALRASDWAQCRKQVGQIVLQLK
CHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEE
PGGGSGPGQIDTLGLLRELLVKTLEFGVATQLSHNPTLFEKTQRLAAAVREANSIAGLRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AASGLKSMWIDVDLHVSHTHDQQETLRRLLLLLVENIGELLDDDTWLRGQLDVVQTVITG
HHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PLKIQALLEAEKRLKEVIYKQSLVKHGLREATATLKATMTSFVSHMSDAVAANDDYQQTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AAHIERISRTEDVLELNRILENLLDETRSAQSDSRRVHAQMIEERDAAQHAANHIKQLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAQMSALVREDPMTHSLNRRGLDDEFAREASRAERFNTPFSIAVLDVDNFKALNDRRGH
HHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCC
NTGDEALIHLVKVAKEELRLSDHIARIGGEEFLIILPNTPVAEAVQIVTRLQRSLTKKYF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LDNNERVLITFSAGVAERRAGETQEALIARADSAMYEAKHSGKNRVCVAPDALPQAAG
CCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA