| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317598
Identifier: 74317598
GI number: 74317598
Start: 1663770
End: 1664414
Strand: Direct
Name: 74317598
Synonym: Tbd_1580
Alternate gene names: NA
Gene position: 1663770-1664414 (Clockwise)
Preceding gene: 74317597
Following gene: 74317605
Centisome position: 57.18
GC content: 67.13
Gene sequence:
>645_bases ATGCTGTTCGCCAATCGCCACCAAGCCGCCGAGCGTCTTGCCCACGCGCTCGCCGCCTACAAGGGCAAGAATCCGCTAAT CCTCGCGATTCCGCGCGGCGCGGTGCCGATGGGGCAAACACTTGCTCAGGAATTGCGCGGCGAACTCGACGTCGTGCTCG TGCGCAAGCTGCGCGCGCCGTTCAATCCGGAATTCGCACTCGGCTCGATCGACGAGTCGGGCTGGGCATATGTCGCCGAC CATGCGGAATCCGCAGGCGGCACGGCCGCGTATCTCGAACAGGAAAAGCAGGCGCAGCTCGCGACGATCCGCGCGCGGCG CGCGCAATACACCCCGCTTCGCGCACCGATCGACCCGGCCGGGCGCATCGTGATCGTCGTCGACGACGGGCTGGCGACCG GCGCGACGATGATTTCCGCACTGCACGCACTACGCGCGAGAAAGCCCGCCCACCTGGTTTGCGCCGTGCCGGTCGCGCCC GCGGACACGGTCGAGAAGATCCGCGCCTACGCCGACGAGGTGGTCTGCCTTTCGACGCCCGAATTCTTCCGGGCCGTAGG GCAGTTCTACGCGGATTTTCCACAGGTCGACGACGAGGAGGTCATCGAAATCCTGCGTGAGGCCGGCGCACACCGGGCCG CCTAG
Upstream 100 bases:
>100_bases GCGTGCGCGAGGTCTACAAGGACGGCGCGCTGATCTGGCACCGCAAGCCTTGAAGGCCGCTGCGGCCTAAGATGAAGGTC TCGACAAGGAGGGGAACGCC
Downstream 100 bases:
>100_bases CCCTCAGCGCGGCTTCACCCGCACGCCGTCCTCGATCGTCTCGTCGGGATGCGCGACGATGCGGTCGCCTGCCGCAACGC CCGCCAACACCTCGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLFANRHQAAERLAHALAAYKGKNPLILAIPRGAVPMGQTLAQELRGELDVVLVRKLRAPFNPEFALGSIDESGWAYVAD HAESAGGTAAYLEQEKQAQLATIRARRAQYTPLRAPIDPAGRIVIVVDDGLATGATMISALHALRARKPAHLVCAVPVAP ADTVEKIRAYADEVVCLSTPEFFRAVGQFYADFPQVDDEEVIEILREAGAHRAA
Sequences:
>Translated_214_residues MLFANRHQAAERLAHALAAYKGKNPLILAIPRGAVPMGQTLAQELRGELDVVLVRKLRAPFNPEFALGSIDESGWAYVAD HAESAGGTAAYLEQEKQAQLATIRARRAQYTPLRAPIDPAGRIVIVVDDGLATGATMISALHALRARKPAHLVCAVPVAP ADTVEKIRAYADEVVCLSTPEFFRAVGQFYADFPQVDDEEVIEILREAGAHRAA >Mature_214_residues MLFANRHQAAERLAHALAAYKGKNPLILAIPRGAVPMGQTLAQELRGELDVVLVRKLRAPFNPEFALGSIDESGWAYVAD HAESAGGTAAYLEQEKQAQLATIRARRAQYTPLRAPIDPAGRIVIVVDDGLATGATMISALHALRARKPAHLVCAVPVAP ADTVEKIRAYADEVVCLSTPEFFRAVGQFYADFPQVDDEEVIEILREAGAHRAA
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 23115; Mature: 23115
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFANRHQAAERLAHALAAYKGKNPLILAIPRGAVPMGQTLAQELRGELDVVLVRKLRAP CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHCCC FNPEFALGSIDESGWAYVADHAESAGGTAAYLEQEKQAQLATIRARRAQYTPLRAPIDPA CCCCEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GRIVIVVDDGLATGATMISALHALRARKPAHLVCAVPVAPADTVEKIRAYADEVVCLSTP CEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCEEEECCH EFFRAVGQFYADFPQVDDEEVIEILREAGAHRAA HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLFANRHQAAERLAHALAAYKGKNPLILAIPRGAVPMGQTLAQELRGELDVVLVRKLRAP CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHCCC FNPEFALGSIDESGWAYVADHAESAGGTAAYLEQEKQAQLATIRARRAQYTPLRAPIDPA CCCCEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GRIVIVVDDGLATGATMISALHALRARKPAHLVCAVPVAPADTVEKIRAYADEVVCLSTP CEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCEEEECCH EFFRAVGQFYADFPQVDDEEVIEILREAGAHRAA HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]