Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317588

Identifier: 74317588

GI number: 74317588

Start: 1654205

End: 1655479

Strand: Direct

Name: 74317588

Synonym: Tbd_1570

Alternate gene names: NA

Gene position: 1654205-1655479 (Clockwise)

Preceding gene: 74317587

Following gene: 74317589

Centisome position: 56.85

GC content: 66.27

Gene sequence:

>1275_bases
ATGCGCCTGCCCGCCCTGCCCCCCGTCCGCGGCCCGCTCTCGCGGATCGTCCAGCTCGGCTACACGACGGCGCGCCTGTT
CACGCAGAACGGGCTGCAAAACCACGCCGCGGCCACCGCCTTCTATTTCCTGCTCTCGGCGACTCCGCTGCTGCTGCTGC
TCAGCTATGGGCTGACCCTGCTCGGCCAGATCGCCGAGAATTCGGTTCCCGCGACGATCCTGCTCGCCGCGCTCTACGAG
CAGATGCGACTCGACAGCCTGACCGAGCTGGGCTTCATTCCGAGCCAGACCGAACTCACCGCCGGCAGCGTCGGCCTCGT
CACGCTGCTGCTGTCGTCCCGCGGCCTCGTCAACACGATGCAGGGCGCGTTCCGCATCATCTTCCCGGCGCGCGAGAAAC
GCAGCTTCGTCGGCTCGTGGATCCTGCCGCTCGTCGTCCTGCCGCTCCTGTTCGCGCTAATGGGTGTCGCCGCGCTCGCC
CAGGTGACGCTGACGTTTCTCGGGCAAAACGACTTCATCGGCACCGGCAACGCGCGCGTGTTGCAGGTGCTCAATTCGCT
GTTCGGCTTCGCCATGGTCTGGGCGCTGCTCTTCACCGCCTACTGGCGGCTGCCGCGCCGCCACCCGCCCGCACGCGTCG
CCGCGGTGTTCGCGCTCGGCGCCATCGCCAGCCTTGGTCTCCTGCTTGTCCTGTTCGGCGCCTTCTTCGAACTCGAAAAC
TACCTGAGCCTCTACGGCGCGCTCGGCGGCGTCGTCTTCGTCCTGATCGGCGCCTACTTCGCGTTTCTGCTACTGTATTT
CTGGGCCCAGGCCCTGTACGCCTACGGCAAGGCCGACATCATCGCGCTCGAAAAACTGTTCCTGAGCCATAGCGGCGACG
GCGATCCGCTCGAGCGCTACGTCTTCGCCGACAGCCATCCGCTGATGGAAAAATACGGCCAGATCCATCCCGCCGGGCAC
GCCCTGATCGAGGAAGGCGACACCTCGCACACCGCGTATTTCCTGTGCTCGGGGCACGCCGCCGTGTACAAGAAAACCGA
AGCAGGCCGCCGCCGCCTCAACGAGCTGCAGCAGGGCCAGCTCTTCGGCGAAATGGCCTACCTGCTCAACGAGCCGCGCA
CCGCGTCGGTCGTCACCGAAAGCGAAGTCACCGTGCTCGCGCTGCCGCCGCAAATTCTCGAAGAGCTCATGCAGCACTCC
GCCCTGCTCTCGCGCCGCATCATCGCGACGCTATGTCTGCGGCTCGAACGGATGAACGCCGAACGGGCGGCGTAG

Upstream 100 bases:

>100_bases
GACCTCGCAGGCCAACCTCGACAAGGCGCTCAAGCGGATCGCCCAGGCGATCGCCGGCTGAGCGCTGGCCCGGCGCGCGC
GCTGAAGGTAGGCTAGCGCC

Downstream 100 bases:

>100_bases
GGCAACGCGCACGGCGTGGCTGCCGCTCCGTGTCCTTGCCGCGGGCTTCACCGTCAGGCGGTGAGTCGTGCTGCAGAGCA
TCCGTTTTTGCACTCAAGAT

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRLPALPPVRGPLSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTLLGQIAENSVPATILLAALYE
QMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTMQGAFRIIFPAREKRSFVGSWILPLVVLPLLFALMGVAALA
QVTLTFLGQNDFIGTGNARVLQVLNSLFGFAMVWALLFTAYWRLPRRHPPARVAAVFALGAIASLGLLLVLFGAFFELEN
YLSLYGALGGVVFVLIGAYFAFLLLYFWAQALYAYGKADIIALEKLFLSHSGDGDPLERYVFADSHPLMEKYGQIHPAGH
ALIEEGDTSHTAYFLCSGHAAVYKKTEAGRRRLNELQQGQLFGEMAYLLNEPRTASVVTESEVTVLALPPQILEELMQHS
ALLSRRIIATLCLRLERMNAERAA

Sequences:

>Translated_424_residues
MRLPALPPVRGPLSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTLLGQIAENSVPATILLAALYE
QMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTMQGAFRIIFPAREKRSFVGSWILPLVVLPLLFALMGVAALA
QVTLTFLGQNDFIGTGNARVLQVLNSLFGFAMVWALLFTAYWRLPRRHPPARVAAVFALGAIASLGLLLVLFGAFFELEN
YLSLYGALGGVVFVLIGAYFAFLLLYFWAQALYAYGKADIIALEKLFLSHSGDGDPLERYVFADSHPLMEKYGQIHPAGH
ALIEEGDTSHTAYFLCSGHAAVYKKTEAGRRRLNELQQGQLFGEMAYLLNEPRTASVVTESEVTVLALPPQILEELMQHS
ALLSRRIIATLCLRLERMNAERAA
>Mature_424_residues
MRLPALPPVRGPLSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTLLGQIAENSVPATILLAALYE
QMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTMQGAFRIIFPAREKRSFVGSWILPLVVLPLLFALMGVAALA
QVTLTFLGQNDFIGTGNARVLQVLNSLFGFAMVWALLFTAYWRLPRRHPPARVAAVFALGAIASLGLLLVLFGAFFELEN
YLSLYGALGGVVFVLIGAYFAFLLLYFWAQALYAYGKADIIALEKLFLSHSGDGDPLERYVFADSHPLMEKYGQIHPAGH
ALIEEGDTSHTAYFLCSGHAAVYKKTEAGRRRLNELQQGQLFGEMAYLLNEPRTASVVTESEVTVLALPPQILEELMQHS
ALLSRRIIATLCLRLERMNAERAA

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46465; Mature: 46465

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPALPPVRGPLSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTL
CCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQIAENSVPATILLAALYEQMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTM
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
QGAFRIIFPAREKRSFVGSWILPLVVLPLLFALMGVAALAQVTLTFLGQNDFIGTGNARV
CCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LQVLNSLFGFAMVWALLFTAYWRLPRRHPPARVAAVFALGAIASLGLLLVLFGAFFELEN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSLYGALGGVVFVLIGAYFAFLLLYFWAQALYAYGKADIIALEKLFLSHSGDGDPLERY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH
VFADSHPLMEKYGQIHPAGHALIEEGDTSHTAYFLCSGHAAVYKKTEAGRRRLNELQQGQ
EECCCCHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LFGEMAYLLNEPRTASVVTESEVTVLALPPQILEELMQHSALLSRRIIATLCLRLERMNA
HHHHHHHHHCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAA
HCCC
>Mature Secondary Structure
MRLPALPPVRGPLSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTL
CCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQIAENSVPATILLAALYEQMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTM
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
QGAFRIIFPAREKRSFVGSWILPLVVLPLLFALMGVAALAQVTLTFLGQNDFIGTGNARV
CCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LQVLNSLFGFAMVWALLFTAYWRLPRRHPPARVAAVFALGAIASLGLLLVLFGAFFELEN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSLYGALGGVVFVLIGAYFAFLLLYFWAQALYAYGKADIIALEKLFLSHSGDGDPLERY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH
VFADSHPLMEKYGQIHPAGHALIEEGDTSHTAYFLCSGHAAVYKKTEAGRRRLNELQQGQ
EECCCCHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LFGEMAYLLNEPRTASVVTESEVTVLALPPQILEELMQHSALLSRRIIATLCLRLERMNA
HHHHHHHHHCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA