Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317577

Identifier: 74317577

GI number: 74317577

Start: 1642692

End: 1642919

Strand: Reverse

Name: 74317577

Synonym: Tbd_1559

Alternate gene names: NA

Gene position: 1642919-1642692 (Counterclockwise)

Preceding gene: 74317578

Following gene: 74317572

Centisome position: 56.46

GC content: 68.42

Gene sequence:

>228_bases
GTGAGCGAGACGCCTTACGCGCCCATTCCCTGCGCGCAACACGAGCGTCTCGAGTTCGCCGCGCTCACCGGGCAATGGCT
CGAGGTCAAGATCGATGGGCAAAAACAGCGCCTGCGGCCTCTCGACGTCTATACGCGCGAGGGCGCCGAATGGCTGCGCG
CCGAGACCGACGGCGGCGAGGCGCTCACGCTGCGGCTCGACCGACTGGTCCTGGCGGAAGACGCCTAG

Upstream 100 bases:

>100_bases
TCACGAAGGAGGAGAGCCTCGCCGAGCGCCTCGCGGGCCGCCTCGGCGCGACGATGGCCAAAGCGATGGGGTTGACGGAT
CGCGCGGGCGTGCAGTTGCG

Downstream 100 bases:

>100_bases
AAGACGGGCCCTTGGTTCGGCCGGCGCGCCGGTCACATTTCAGCGGGTTGATCGGTAGCGGTCGCTGCTTCTCGCCGTGT
TCACAGGACTTCGACACTGC

Product: transcriptional antiterminator, Rof

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MSETPYAPIPCAQHERLEFAALTGQWLEVKIDGQKQRLRPLDVYTREGAEWLRAETDGGEALTLRLDRLVLAEDA

Sequences:

>Translated_75_residues
MSETPYAPIPCAQHERLEFAALTGQWLEVKIDGQKQRLRPLDVYTREGAEWLRAETDGGEALTLRLDRLVLAEDA
>Mature_74_residues
SETPYAPIPCAQHERLEFAALTGQWLEVKIDGQKQRLRPLDVYTREGAEWLRAETDGGEALTLRLDRLVLAEDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8510; Mature: 8379

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPYAPIPCAQHERLEFAALTGQWLEVKIDGQKQRLRPLDVYTREGAEWLRAETDGGE
CCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCEEEEECCCCC
ALTLRLDRLVLAEDA
EEEEEEEEEEEECCC
>Mature Secondary Structure 
SETPYAPIPCAQHERLEFAALTGQWLEVKIDGQKQRLRPLDVYTREGAEWLRAETDGGE
CCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCEEEEECCCCC
ALTLRLDRLVLAEDA
EEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA