| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yceG [C]
Identifier: 74317562
GI number: 74317562
Start: 1628358
End: 1629359
Strand: Reverse
Name: yceG [C]
Synonym: Tbd_1544
Alternate gene names: 74317562
Gene position: 1629359-1628358 (Counterclockwise)
Preceding gene: 74317563
Following gene: 74317561
Centisome position: 56.0
GC content: 64.67
Gene sequence:
>1002_bases ATGCTGCGCTCTATGAAGATCTGGTTTAAACGCTTGCTCGGATTCGGCACGCTGGCGGCAGTGCTGCTCGCGGCGGGGCT TGCCTGGTATGCGACGCGGCCGCTCGTCATAACGCCCTTGCCGAAAACGGTCAACGTCGCGCCCGGCATGCACCTCAAGA GCCTGAGCGTGATGCTCGAACGGGAAGGCGTCGTCGGCGACGCGCGGGTGTTCTGGCTGCTCGGTCGCGTGCTCGGCAAG GCCGGGACGCTCAAGGTCGGCGTCTACACGCTGGACAAGCCGCTCACACCGATCGAGCTCTACGGCAAGATCGAGCGCGG CGACGTCTCGCAGGCGATGGTGCAGTTCATCGAGGGACGGAGCTGGCGCGAAATACGGACGGTGCTCGCGTCGCAACCGC TCCTGAAGAACGAGAGCGCAGGCATGAGCGACACACAGGTGTTGCGCGCAATCGGCGCGAGCGAGGCATACCCCGAGGGC CTGTTCTTTCCCGACACCTATTTCTACGCGCCGCACACGTCCGATCTCAACGTGCTGCGCCGCGCATATCGCCTGCAGCG TGAAAAACTCACGAGCGCATGGCAGGCGCGCGCGCCGGGGCTACCCTACGAAACCCCCTATGAGGCCCTGATCATGGCGT CGATCGTGGAGAAGGAAACCGGCGCCGCGTTCGAGCGCCCGATGATCGCGGGCGTGTTCCTCAACCGGCTCAAGCTCGGC ATGCGGCTGCAAACCGATCCGACCGTGATTTACGGTCTAGGCGAACGCTTCGACGGCAATTTGCGCAAAGTCGATCTTCT TGCCGACACGCCGTACAACACCTATACCCGAACCGGGCTGCCGCCCACACCGATCGCGATGCCGAGCGCGGAGGCGATCC GCGCGGCGTTGAACCCGGCGCAGACCGATGCGCTCTATTTCGTCTCGCGCGGCGACGGCACCCACGTCTTTTCGAGCGAC CTCGCGGCACACAACCGCGCCGTCCGCCGCTACCAGAAATGA
Upstream 100 bases:
>100_bases GCCGACGAAGTCATGATCTGCAACAGCCTGATCGGCGTGCGCCGGGTCGCGCGCCTCGGCGACAAGACCTGGATGCCTGC TGGCTGGACCGACACTTTGA
Downstream 100 bases:
>100_bases GCCTTCCCGGAAAATTCATCACCCTCGAGGGCGTCGACGGCGCCGGCAAGAGCACCCACGTGGGCTTCGTCGCCGAGTGG TTGCGCGGGCAGGGCAGGGA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLRSMKIWFKRLLGFGTLAAVLLAAGLAWYATRPLVITPLPKTVNVAPGMHLKSLSVMLEREGVVGDARVFWLLGRVLGK AGTLKVGVYTLDKPLTPIELYGKIERGDVSQAMVQFIEGRSWREIRTVLASQPLLKNESAGMSDTQVLRAIGASEAYPEG LFFPDTYFYAPHTSDLNVLRRAYRLQREKLTSAWQARAPGLPYETPYEALIMASIVEKETGAAFERPMIAGVFLNRLKLG MRLQTDPTVIYGLGERFDGNLRKVDLLADTPYNTYTRTGLPPTPIAMPSAEAIRAALNPAQTDALYFVSRGDGTHVFSSD LAAHNRAVRRYQK
Sequences:
>Translated_333_residues MLRSMKIWFKRLLGFGTLAAVLLAAGLAWYATRPLVITPLPKTVNVAPGMHLKSLSVMLEREGVVGDARVFWLLGRVLGK AGTLKVGVYTLDKPLTPIELYGKIERGDVSQAMVQFIEGRSWREIRTVLASQPLLKNESAGMSDTQVLRAIGASEAYPEG LFFPDTYFYAPHTSDLNVLRRAYRLQREKLTSAWQARAPGLPYETPYEALIMASIVEKETGAAFERPMIAGVFLNRLKLG MRLQTDPTVIYGLGERFDGNLRKVDLLADTPYNTYTRTGLPPTPIAMPSAEAIRAALNPAQTDALYFVSRGDGTHVFSSD LAAHNRAVRRYQK >Mature_333_residues MLRSMKIWFKRLLGFGTLAAVLLAAGLAWYATRPLVITPLPKTVNVAPGMHLKSLSVMLEREGVVGDARVFWLLGRVLGK AGTLKVGVYTLDKPLTPIELYGKIERGDVSQAMVQFIEGRSWREIRTVLASQPLLKNESAGMSDTQVLRAIGASEAYPEG LFFPDTYFYAPHTSDLNVLRRAYRLQREKLTSAWQARAPGLPYETPYEALIMASIVEKETGAAFERPMIAGVFLNRLKLG MRLQTDPTVIYGLGERFDGNLRKVDLLADTPYNTYTRTGLPPTPIAMPSAEAIRAALNPAQTDALYFVSRGDGTHVFSSD LAAHNRAVRRYQK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=316, Percent_Identity=38.9240506329114, Blast_Score=223, Evalue=9e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36933; Mature: 36933
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSMKIWFKRLLGFGTLAAVLLAAGLAWYATRPLVITPLPKTVNVAPGMHLKSLSVMLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHH REGVVGDARVFWLLGRVLGKAGTLKVGVYTLDKPLTPIELYGKIERGDVSQAMVQFIEGR HCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCC SWREIRTVLASQPLLKNESAGMSDTQVLRAIGASEAYPEGLFFPDTYFYAPHTSDLNVLR CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHH RAYRLQREKLTSAWQARAPGLPYETPYEALIMASIVEKETGAAFERPMIAGVFLNRLKLG HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHC MRLQTDPTVIYGLGERFDGNLRKVDLLADTPYNTYTRTGLPPTPIAMPSAEAIRAALNPA CEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC QTDALYFVSRGDGTHVFSSDLAAHNRAVRRYQK CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRSMKIWFKRLLGFGTLAAVLLAAGLAWYATRPLVITPLPKTVNVAPGMHLKSLSVMLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHH REGVVGDARVFWLLGRVLGKAGTLKVGVYTLDKPLTPIELYGKIERGDVSQAMVQFIEGR HCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCC SWREIRTVLASQPLLKNESAGMSDTQVLRAIGASEAYPEGLFFPDTYFYAPHTSDLNVLR CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHH RAYRLQREKLTSAWQARAPGLPYETPYEALIMASIVEKETGAAFERPMIAGVFLNRLKLG HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHC MRLQTDPTVIYGLGERFDGNLRKVDLLADTPYNTYTRTGLPPTPIAMPSAEAIRAALNPA CEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC QTDALYFVSRGDGTHVFSSDLAAHNRAVRRYQK CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]