Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317559

Identifier: 74317559

GI number: 74317559

Start: 1626384

End: 1626755

Strand: Reverse

Name: 74317559

Synonym: Tbd_1541

Alternate gene names: NA

Gene position: 1626755-1626384 (Counterclockwise)

Preceding gene: 74317560

Following gene: 74317558

Centisome position: 55.91

GC content: 62.37

Gene sequence:

>372_bases
ATGAACGCAGCAGTCAACGAGGTTACAGCGCCGGTCCGCCCCGGTGTGCTGTCGCTGTCGATCAAGGAGAAGTCCGCGCT
GTTTGCCGCGTACATGCCGTTCATCAAGGGCGGCGGCCTGTTCATCCCGACGAACAAGCAGTACAAGATGGGCGAGGAGA
TCTTCATGCTCCTCACCCTGATGGACGACCCGACCAAGCTGCCGGTCTCCGGCAAGGTCGTCTGGGTGACGCCGGCCGGC
GCACACGGCAGCCGCACCCAGGGCGTCGGGGTCCAGTTCGCGTTCAACGAAAGCGGCAAGGCGGCGCAGAACAAGATTGA
AGGTTTGCTCGGCGGTTCGTTAAAATCGGTGCGTCCCACCCACACCATGTAG

Upstream 100 bases:

>100_bases
CCGACGAGGGCAGGACGCTGGCCCACCCGCTCAACCGCAGTCTGCAATTGCAGGCCTGGCTGGTCGAATACCGGCATGTC
TTTGATTAAGAGAGTCGATC

Downstream 100 bases:

>100_bases
CGCCGACCCGCGGTGCTCACCCACCGCATGTACATCGACTCGCACTGCCACATCAATTTTCCCGAGCTCGCCGGCAGGCT
GCCCGAGGTGTTCGACCTGA

Product: type IV pilus assembly protein PilZ

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilZ; Type IV Fimbriae Assembly Protein; Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilZ; Tfp Pilus Assembly Protein PilZ; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein; Pilus Biogenesis Protein PilZ; Type Iv Pilus Assembly Pilz; DNA Polymerase-Related Protein; Tfp Pilus Assembly Protein; TYPE 4 Pilus Assembly Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNAAVNEVTAPVRPGVLSLSIKEKSALFAAYMPFIKGGGLFIPTNKQYKMGEEIFMLLTLMDDPTKLPVSGKVVWVTPAG
AHGSRTQGVGVQFAFNESGKAAQNKIEGLLGGSLKSVRPTHTM

Sequences:

>Translated_123_residues
MNAAVNEVTAPVRPGVLSLSIKEKSALFAAYMPFIKGGGLFIPTNKQYKMGEEIFMLLTLMDDPTKLPVSGKVVWVTPAG
AHGSRTQGVGVQFAFNESGKAAQNKIEGLLGGSLKSVRPTHTM
>Mature_123_residues
MNAAVNEVTAPVRPGVLSLSIKEKSALFAAYMPFIKGGGLFIPTNKQYKMGEEIFMLLTLMDDPTKLPVSGKVVWVTPAG
AHGSRTQGVGVQFAFNESGKAAQNKIEGLLGGSLKSVRPTHTM

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13077; Mature: 13077

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAVNEVTAPVRPGVLSLSIKEKSALFAAYMPFIKGGGLFIPTNKQYKMGEEIFMLLTL
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEE
MDDPTKLPVSGKVVWVTPAGAHGSRTQGVGVQFAFNESGKAAQNKIEGLLGGSLKSVRPT
CCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCC
HTM
CCC
>Mature Secondary Structure
MNAAVNEVTAPVRPGVLSLSIKEKSALFAAYMPFIKGGGLFIPTNKQYKMGEEIFMLLTL
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEE
MDDPTKLPVSGKVVWVTPAGAHGSRTQGVGVQFAFNESGKAAQNKIEGLLGGSLKSVRPT
CCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCC
HTM
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA