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The map label for this gene is ywhC [H]

Identifier: 74317544

GI number: 74317544

Start: 1613850

End: 1614554

Strand: Reverse

Name: ywhC [H]

Synonym: Tbd_1526

Alternate gene names: 74317544

Gene position: 1614554-1613850 (Counterclockwise)

Preceding gene: 74317545

Following gene: 74317543

Centisome position: 55.49

GC content: 65.53

Gene sequence:

>705_bases
ATGGAACTCACGCTCATCCAGAAAATCGCGGTGTTCGCGCTGCCGGTGATTTTTGCGATCACGCTGCACGAGGCGGCGCA
CGGCTACGTCGCGCGTTATTTCGGTGACATGACCGCAGCCGCCGCCGGCCGCATCACGCTCAATCCGCTCAAGCACATCG
ACCCGGTCGGGACCATCCTGGTGCCGCTCGTCATTCTGGTCATGAGCAAGCTGCTCGGCGGCGGGGCGATCCTGTTCGGT
TGGGCCAAGCCGGTGCCGGTCAACTTCGCGCAGCTGCGGCGGCCGAAGCAGGACATGCTGTGGGTCGCCCTGGCGGGGCC
GGGGGTCAATTTCTTCATGGCGCTGTTCTGGGCGCTGATGATCCAGCTCGGCCATGCGCTCGGCAACGGCTTCGTCAGCG
CGCCACTGATGCTGATGGGCGCCTCCGGCGTATTCATCAACGTCATTCTCATGGCGCTCAATCTTCTGCCGCTGCCGCCG
CTCGACGGCGGCCGCATCGCCGTGAGTCTCCTGCCCGTCAAGCAGGCCATGCAGTTCGCGCGCATCGAACCCTACGGCTT
CTTCATTCTGCTCGGGCTCCTGTTCACCGGCATCCTCGGCTTCGTCCTGTGGCCGCTCATCAGCCTGTTCGTCGGCCTGG
CCGCGCTGTTGACCGGCCTCGACCCGGCGCAGCTCGTCGGCCTCATCCAGGTCGTGCTCGCCTGA

Upstream 100 bases:

>100_bases
TGCGGCCTGACGCCGACGACGGTCGTCGACCTGACGGCCGAGACGCCGGCCGTCGTGCGCTATGGCAAGGGCGAGGCTTC
GGCCTTCGAAGCCTGAGCCC

Downstream 100 bases:

>100_bases
CTTTCCTTTTCTAGCGCTCAAGCCAAAACCATGTATTCCGATCGCGTTCTTTCCGGCATGCGCCCCACCGGGCGTCTGCA
TCTCGGCCACTATCACGGCG

Product: putative integral membrane transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MELTLIQKIAVFALPVIFAITLHEAAHGYVARYFGDMTAAAAGRITLNPLKHIDPVGTILVPLVILVMSKLLGGGAILFG
WAKPVPVNFAQLRRPKQDMLWVALAGPGVNFFMALFWALMIQLGHALGNGFVSAPLMLMGASGVFINVILMALNLLPLPP
LDGGRIAVSLLPVKQAMQFARIEPYGFFILLGLLFTGILGFVLWPLISLFVGLAALLTGLDPAQLVGLIQVVLA

Sequences:

>Translated_234_residues
MELTLIQKIAVFALPVIFAITLHEAAHGYVARYFGDMTAAAAGRITLNPLKHIDPVGTILVPLVILVMSKLLGGGAILFG
WAKPVPVNFAQLRRPKQDMLWVALAGPGVNFFMALFWALMIQLGHALGNGFVSAPLMLMGASGVFINVILMALNLLPLPP
LDGGRIAVSLLPVKQAMQFARIEPYGFFILLGLLFTGILGFVLWPLISLFVGLAALLTGLDPAQLVGLIQVVLA
>Mature_234_residues
MELTLIQKIAVFALPVIFAITLHEAAHGYVARYFGDMTAAAAGRITLNPLKHIDPVGTILVPLVILVMSKLLGGGAILFG
WAKPVPVNFAQLRRPKQDMLWVALAGPGVNFFMALFWALMIQLGHALGNGFVSAPLMLMGASGVFINVILMALNLLPLPP
LDGGRIAVSLLPVKQAMQFARIEPYGFFILLGLLFTGILGFVLWPLISLFVGLAALLTGLDPAQLVGLIQVVLA

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 25001; Mature: 25001

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTLIQKIAVFALPVIFAITLHEAAHGYVARYFGDMTAAAAGRITLNPLKHIDPVGTIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHCCHHHHHH
VPLVILVMSKLLGGGAILFGWAKPVPVNFAQLRRPKQDMLWVALAGPGVNFFMALFWALM
HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHH
IQLGHALGNGFVSAPLMLMGASGVFINVILMALNLLPLPPLDGGRIAVSLLPVKQAMQFA
HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHH
RIEPYGFFILLGLLFTGILGFVLWPLISLFVGLAALLTGLDPAQLVGLIQVVLA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MELTLIQKIAVFALPVIFAITLHEAAHGYVARYFGDMTAAAAGRITLNPLKHIDPVGTIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHCCHHHHHH
VPLVILVMSKLLGGGAILFGWAKPVPVNFAQLRRPKQDMLWVALAGPGVNFFMALFWALM
HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHH
IQLGHALGNGFVSAPLMLMGASGVFINVILMALNLLPLPPLDGGRIAVSLLPVKQAMQFA
HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHH
RIEPYGFFILLGLLFTGILGFVLWPLISLFVGLAALLTGLDPAQLVGLIQVVLA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]