| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317536
Identifier: 74317536
GI number: 74317536
Start: 1606057
End: 1606596
Strand: Reverse
Name: 74317536
Synonym: Tbd_1518
Alternate gene names: NA
Gene position: 1606596-1606057 (Counterclockwise)
Preceding gene: 74317537
Following gene: 74317535
Centisome position: 55.21
GC content: 70.0
Gene sequence:
>540_bases ATGACCGCGAGCCTGCTCGGCGCGGCGGCCCCGGGATTCGATCGGCCGCTTGAGGTGCTGGAGGCCTGCCATGCGCGCAT CCTCAAGCAATGCGCGACCCTCGACAGGCTTCGCGCACACCTGCTCGAGCACGGCGCCGACGCCGAGGCGCGACAGGCGG CGCGCGCGATCCTGACGTATTTCGATACCGCCGGCATGCATCACCACGACGACGAGGAGCGCAATCTCTTGCCGCTGCTC GAGCAGGCAGGTGCGCCGGGCGCCTGCGAGCTGACTGAACTCCTCGCACACGAGCACGACGCGCAGGCGCAGCTATGGCG CCGCCTCCGACAGCAACTCGAACAGATCGCAGGAGGTGCCGCGGCCGGGCTCGACCCTGCCCTGACCCAAGCTTTCGTCG CGTCGCATCGCGCCCATCTCGAATTCGAGAACGCGCGTGTGCTGCCGCTCGCTCGTGCCCATCTCGGGGCCGATGCGCTC GAGCGGCTCGGGCGTGCGATGGCCGCGCGCCGCGGCATCCCCTTCGAAGCCAGGTCGTGA
Upstream 100 bases:
>100_bases CGGCCTACCAGGACAAGCTGGTCGATGCGATCGTCGTCGGCGTCAAGGATTATTTCGCCAGACACCCGCTGACCGGGCCG TCGCGGCTGACGCGCAATCC
Downstream 100 bases:
>100_bases GCATTCAGGTTCTGTCGGATGTGCTGATTTCCCAGATCGCGGCGGGCGAGGTCGTCGAGCGTCCGGCCGCGGCGCTCAAG GAAATCCTCGAGAACAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTASLLGAAAPGFDRPLEVLEACHARILKQCATLDRLRAHLLEHGADAEARQAARAILTYFDTAGMHHHDDEERNLLPLL EQAGAPGACELTELLAHEHDAQAQLWRRLRQQLEQIAGGAAAGLDPALTQAFVASHRAHLEFENARVLPLARAHLGADAL ERLGRAMAARRGIPFEARS
Sequences:
>Translated_179_residues MTASLLGAAAPGFDRPLEVLEACHARILKQCATLDRLRAHLLEHGADAEARQAARAILTYFDTAGMHHHDDEERNLLPLL EQAGAPGACELTELLAHEHDAQAQLWRRLRQQLEQIAGGAAAGLDPALTQAFVASHRAHLEFENARVLPLARAHLGADAL ERLGRAMAARRGIPFEARS >Mature_178_residues TASLLGAAAPGFDRPLEVLEACHARILKQCATLDRLRAHLLEHGADAEARQAARAILTYFDTAGMHHHDDEERNLLPLLE QAGAPGACELTELLAHEHDAQAQLWRRLRQQLEQIAGGAAAGLDPALTQAFVASHRAHLEFENARVLPLARAHLGADALE RLGRAMAARRGIPFEARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012312 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 19460; Mature: 19329
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLLGAAAPGFDRPLEVLEACHARILKQCATLDRLRAHLLEHGADAEARQAARAILTY CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FDTAGMHHHDDEERNLLPLLEQAGAPGACELTELLAHEHDAQAQLWRRLRQQLEQIAGGA HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AAGLDPALTQAFVASHRAHLEFENARVLPLARAHLGADALERLGRAMAARRGIPFEARS CCCCCHHHHHHHHHHHHHHCEECCCEEHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TASLLGAAAPGFDRPLEVLEACHARILKQCATLDRLRAHLLEHGADAEARQAARAILTY CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FDTAGMHHHDDEERNLLPLLEQAGAPGACELTELLAHEHDAQAQLWRRLRQQLEQIAGGA HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AAGLDPALTQAFVASHRAHLEFENARVLPLARAHLGADALERLGRAMAARRGIPFEARS CCCCCHHHHHHHHHHHHHHCEECCCEEHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]