| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317531
Identifier: 74317531
GI number: 74317531
Start: 1601616
End: 1602638
Strand: Direct
Name: 74317531
Synonym: Tbd_1513
Alternate gene names: NA
Gene position: 1601616-1602638 (Clockwise)
Preceding gene: 74317529
Following gene: 74317532
Centisome position: 55.04
GC content: 68.33
Gene sequence:
>1023_bases ATGAACCTAGACGAACTCCAGGCTGTCGCCCGAGCCATTGTCGCCCCGCAGAAAGGCGTGCTCGCAGCGGACGAAAGCGG GCCCACGATCAAGAAGCGTTTCGACACCATCGCGGTCGAATCGACCGAGAAAAGCCGGCGCCGCTATCGCGAAATTATGT TCACGGCGGAAAGCATCGAACGCTACATCGGCGGCGTCATTCTGTACGACGAAACCCTGCGCCAGAGCACGCGCGACGGC ACGCCTTTCCCGCAGCTGCTGGCCGGACGCGGCATCATCCCGGGCATCAAGGTCGACCAGGGCGCGAAGCCGCTCGCCCT GTGTCCGGGCGAGAAAGTGACCGAGGGCCTCGACGGCCTGCGCGAGCGTCTCGTCGAATACCACGGGCTCGGGGCGCAGT TCGCCAAGTGGCGCGCGGTCATCGACATCGACGCCCATGACCTCCCCTCCCCGTTCGGCATCCACGCCAACGCCCATGCG CTCGCACGCTACGCGGCGCTCTGCCAGGAAGTGGGGCTCGTCCCGATCGTCGAGCCCGAAGTGCTGATGGACGGCGCGCA CGACGTCGAGCGTTGCGAAGCCGTCACGGCTCGCGCGCTGGAGGCTGTCTTCGCCGAACTCGACGCCCACGGCGTGGGCC TCGAAGGCGTGCTACTCAAGCCCAACATGGTCGTGGCCGGCAAGAAATCCACCCGTCAGGCGGGTGTGCAGGAAGTCGCC GAAGCGACCCTGCGCTGCCTGCGGCGCCACGTACCCGCGGCGGTGCCCGGGATCGTCTTCCTGTCGGGCGGCCAGAGCGC CGAGGAAGCGACCGCCCACCTCAGCGCGATGAACGCGATGGGCCCCCATCCTTGGCAGGTCAGTTTCTCTTACGGCCGCG CCCTGCAGGCGCCGGTCCTTGCGGCGTGGCGCGGACACGAAGCCAACGCCGCCGCGGCCCAGGCCGCGCTACTCGAACGC GCGCGACTCAACGGCCTCGCGCGCGACGGCGCCTACGGGCCCGAAATGGAAAGCGCAGGATGA
Upstream 100 bases:
>100_bases GCCGCGCGCAGGTCTTTCGGGAGCGAATTACGGTCTAGAGTTGGAAGGAAAGCGCCGCCCCGTCTCAAGAGCACGCGCTG TCTACGGAGGCCCGAATGCC
Downstream 100 bases:
>100_bases GCGCGCCCGCCGGCCCGAGCGGCGGTGTCCGGCACTTGGCGGCCTTCGCAGCGACATTTGCAGCCCTCGCCGTGGCGGAC GCACAGGCTGCAGGCCCAGG
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNLDELQAVARAIVAPQKGVLAADESGPTIKKRFDTIAVESTEKSRRRYREIMFTAESIERYIGGVILYDETLRQSTRDG TPFPQLLAGRGIIPGIKVDQGAKPLALCPGEKVTEGLDGLRERLVEYHGLGAQFAKWRAVIDIDAHDLPSPFGIHANAHA LARYAALCQEVGLVPIVEPEVLMDGAHDVERCEAVTARALEAVFAELDAHGVGLEGVLLKPNMVVAGKKSTRQAGVQEVA EATLRCLRRHVPAAVPGIVFLSGGQSAEEATAHLSAMNAMGPHPWQVSFSYGRALQAPVLAAWRGHEANAAAAQAALLER ARLNGLARDGAYGPEMESAG
Sequences:
>Translated_340_residues MNLDELQAVARAIVAPQKGVLAADESGPTIKKRFDTIAVESTEKSRRRYREIMFTAESIERYIGGVILYDETLRQSTRDG TPFPQLLAGRGIIPGIKVDQGAKPLALCPGEKVTEGLDGLRERLVEYHGLGAQFAKWRAVIDIDAHDLPSPFGIHANAHA LARYAALCQEVGLVPIVEPEVLMDGAHDVERCEAVTARALEAVFAELDAHGVGLEGVLLKPNMVVAGKKSTRQAGVQEVA EATLRCLRRHVPAAVPGIVFLSGGQSAEEATAHLSAMNAMGPHPWQVSFSYGRALQAPVLAAWRGHEANAAAAQAALLER ARLNGLARDGAYGPEMESAG >Mature_340_residues MNLDELQAVARAIVAPQKGVLAADESGPTIKKRFDTIAVESTEKSRRRYREIMFTAESIERYIGGVILYDETLRQSTRDG TPFPQLLAGRGIIPGIKVDQGAKPLALCPGEKVTEGLDGLRERLVEYHGLGAQFAKWRAVIDIDAHDLPSPFGIHANAHA LARYAALCQEVGLVPIVEPEVLMDGAHDVERCEAVTARALEAVFAELDAHGVGLEGVLLKPNMVVAGKKSTRQAGVQEVA EATLRCLRRHVPAAVPGIVFLSGGQSAEEATAHLSAMNAMGPHPWQVSFSYGRALQAPVLAAWRGHEANAAAAQAALLER ARLNGLARDGAYGPEMESAG
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI4885063, Length=338, Percent_Identity=51.4792899408284, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI34577112, Length=333, Percent_Identity=52.5525525525526, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI34577110, Length=333, Percent_Identity=52.5525525525526, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI4557305, Length=333, Percent_Identity=52.5525525525526, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI193794814, Length=333, Percent_Identity=52.5525525525526, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI40354205, Length=330, Percent_Identity=53.3333333333333, Blast_Score=332, Evalue=4e-91, Organism=Caenorhabditis elegans, GI71983985, Length=330, Percent_Identity=52.7272727272727, Blast_Score=333, Evalue=7e-92, Organism=Caenorhabditis elegans, GI25150450, Length=332, Percent_Identity=51.5060240963855, Blast_Score=330, Evalue=5e-91, Organism=Caenorhabditis elegans, GI71983990, Length=231, Percent_Identity=51.5151515151515, Blast_Score=232, Evalue=2e-61, Organism=Drosophila melanogaster, GI24650282, Length=331, Percent_Identity=53.4743202416918, Blast_Score=329, Evalue=2e-90, Organism=Drosophila melanogaster, GI24650280, Length=331, Percent_Identity=53.4743202416918, Blast_Score=329, Evalue=2e-90, Organism=Drosophila melanogaster, GI24650278, Length=331, Percent_Identity=53.4743202416918, Blast_Score=329, Evalue=2e-90, Organism=Drosophila melanogaster, GI45553577, Length=333, Percent_Identity=53.1531531531532, Blast_Score=328, Evalue=3e-90, Organism=Drosophila melanogaster, GI221459619, Length=332, Percent_Identity=53.6144578313253, Blast_Score=328, Evalue=4e-90, Organism=Drosophila melanogaster, GI24650288, Length=332, Percent_Identity=53.6144578313253, Blast_Score=328, Evalue=4e-90, Organism=Drosophila melanogaster, GI24650304, Length=331, Percent_Identity=45.9214501510574, Blast_Score=292, Evalue=3e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 36356; Mature: 36356
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDELQAVARAIVAPQKGVLAADESGPTIKKRFDTIAVESTEKSRRRYREIMFTAESIE CCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHH RYIGGVILYDETLRQSTRDGTPFPQLLAGRGIIPGIKVDQGAKPLALCPGEKVTEGLDGL HHHCCEEEECHHHHHHCCCCCCCHHHHHCCCCCCCCEECCCCCCEEECCCHHHHHHHHHH RERLVEYHGLGAQFAKWRAVIDIDAHDLPSPFGIHANAHALARYAALCQEVGLVPIVEPE HHHHHHHHCCCHHHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH VLMDGAHDVERCEAVTARALEAVFAELDAHGVGLEGVLLKPNMVVAGKKSTRQAGVQEVA HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCHHHHHHHHHHH EATLRCLRRHVPAAVPGIVFLSGGQSAEEATAHLSAMNAMGPHPWQVSFSYGRALQAPVL HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHCCHH AAWRGHEANAAAAQAALLERARLNGLARDGAYGPEMESAG HHHCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC >Mature Secondary Structure MNLDELQAVARAIVAPQKGVLAADESGPTIKKRFDTIAVESTEKSRRRYREIMFTAESIE CCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHH RYIGGVILYDETLRQSTRDGTPFPQLLAGRGIIPGIKVDQGAKPLALCPGEKVTEGLDGL HHHCCEEEECHHHHHHCCCCCCCHHHHHCCCCCCCCEECCCCCCEEECCCHHHHHHHHHH RERLVEYHGLGAQFAKWRAVIDIDAHDLPSPFGIHANAHALARYAALCQEVGLVPIVEPE HHHHHHHHCCCHHHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH VLMDGAHDVERCEAVTARALEAVFAELDAHGVGLEGVLLKPNMVVAGKKSTRQAGVQEVA HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCHHHHHHHHHHH EATLRCLRRHVPAAVPGIVFLSGGQSAEEATAHLSAMNAMGPHPWQVSFSYGRALQAPVL HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHCCHH AAWRGHEANAAAAQAALLERARLNGLARDGAYGPEMESAG HHHCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]