| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317486
Identifier: 74317486
GI number: 74317486
Start: 1552329
End: 1553510
Strand: Direct
Name: 74317486
Synonym: Tbd_1468
Alternate gene names: NA
Gene position: 1552329-1553510 (Clockwise)
Preceding gene: 74317485
Following gene: 74317488
Centisome position: 53.35
GC content: 70.98
Gene sequence:
>1182_bases ATGGACGCGAGGCGCGCGGCGGCACCCGACCCGGATTTCGTACTACCCGATTACGCCGGCGGGGGTCTGGTCAACCTCAT GAGTTCGATCACGACGGCGCTCGCGGATGGCAGCCCCTACCCGACACTCACGGCGCTGCCGCCCGAGACGCTCGCCGCCG CCCGGCACGTGCTGATGCTCGTGGTCGACGGGCTGGGCAGCGCCTTTCTGGCGCGCCAGGGCGGGCCGCTGCGGCGCTGC ATGCGCGCCGAGCTCACGTCGGTCTTTCCGTCAACGACGGCGAGCGCGATTCCGACCTTCCTGACCGGGCTCGCGCCGCA GCAACACGGACTGACCGGCTGGCACATGTACTTCCGCGAGATCGGCGCGGTCGTCGCGCCACTTCCGTTCCGTCTGCGCA CCGGACGCCAGGCGCTGCGCGATGCGGGCGTCTCGCCGGGTTCGCTGTTCGGACTCACGCCGCTGTTCGCCCGGCTGACG CGCGCGAGCCACGTCGTCAGCCCGGAGAACATCGTGCATTCCGACTTCAACGTGGCGCTCGCGGGGCCGGCGCAGCGCTA CGGCTACGACAGCCTCGAGGAGATGTTTGCGGTGCTGGCCGACCTGCTGCGCCGGCCCACGCCGAGCTACATCCACGCCT ACTGGCCGCGGCTCGACAGCCTCGCGCACGAACACGGCGTCGACAGCGCCGAAGTCGTCGACGCCTTCAATGCGCTCAAT GCGTCGTTCACGCGCCTGATCGAGTCCGCGCGCGACTGCGTCATCGTGGTCACCGCCGACCACGGCTTCATCGATTCACC ACCCGGGGAAACGATCGATCTCGACGATCACCCCGCGCTGCGCGCGACGCTGCTCTTGCCGCTATGCGGCGAAGCCCGCG CCGCCTACGCCTACGTGCGCGCCGGGCGCGAGGCCGAATTCGAGGCCTATCTCGCGGCGGAACTCGCCGACCGGGTGCGC GTGTACCGGAGCGCGTCGCTCGTCCACGACGGCTGGTTCGGCCCCGGCGAAGCCCATCCCGCGCTCGGCGACCGCATCGG CGACTACCTCCTGCTGCCGCGCGGGCGCGCGATCCTGCGCGACTGGCTGCTCGGCGAAGTGCGCCATGCCCATCTCGGCG TGCACGGCGGCGCGTCGGCGGCAGAAATGCGGGTCCCGCTCGTGGTTGTGGTGCGCGACTGA
Upstream 100 bases:
>100_bases CGCCCGCCCGCAGTTCACCGGCGAGGCCGTGTGACGGGCGCGCCGCACCGGCCCGCACTGCCCCGCTCGCGCTGAACGCC GGCGAGGAACGTTTTTCGAC
Downstream 100 bases:
>100_bases CTACCAGGGCATTTCGCTGCCGTCGAAACGGAAGAAACGCGCGTTCATCGACGGGTCGAATTTCTCGACCAGACGGCGCA TGCCGCGAACGCTCTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Phosphodiesterase / Nucleotide Pyrophosphatase; Phosphodiesterase; Phosphodiesterase I/Nucleotide Pyrophosphatase; Phosphodiesterase/Nucleotide Pyrophosphatase; Nucleotide Pyrophosphatase/Phosphodiesterase I; Type I Phosphodiesterase/Nucleotidepyro Phosphatase; Phosphodiesterase Protein; AP Superfamily Protein
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLMLVVDGLGSAFLARQGGPLRRC MRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFREIGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLT RASHVVSPENIVHSDFNVALAGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVRAGREAEFEAYLAAELADRVR VYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILRDWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD
Sequences:
>Translated_393_residues MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLMLVVDGLGSAFLARQGGPLRRC MRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFREIGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLT RASHVVSPENIVHSDFNVALAGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVRAGREAEFEAYLAAELADRVR VYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILRDWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD >Mature_393_residues MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLMLVVDGLGSAFLARQGGPLRRC MRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFREIGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLT RASHVVSPENIVHSDFNVALAGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVRAGREAEFEAYLAAELADRVR VYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILRDWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42332; Mature: 42332
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLML CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHH VVDGLGSAFLARQGGPLRRCMRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFRE HHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH IGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLTRASHVVSPENIVHSDFNVAL HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEE AGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN CCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVR HHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHHHHHHHH AGREAEFEAYLAAELADRVRVYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHH DWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD HHHHHHHHHHHCCCCCCCCCCEEECCEEEEECC >Mature Secondary Structure MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLML CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHH VVDGLGSAFLARQGGPLRRCMRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFRE HHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH IGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLTRASHVVSPENIVHSDFNVAL HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEE AGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN CCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVR HHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHHHHHHHH AGREAEFEAYLAAELADRVRVYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHH DWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD HHHHHHHHHHHCCCCCCCCCCEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA