Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317460

Identifier: 74317460

GI number: 74317460

Start: 1529144

End: 1529713

Strand: Direct

Name: 74317460

Synonym: Tbd_1442

Alternate gene names: NA

Gene position: 1529144-1529713 (Clockwise)

Preceding gene: 74317459

Following gene: 74317461

Centisome position: 52.55

GC content: 71.4

Gene sequence:

>570_bases
ATGCCGACTGGTGAGCGCGGCCAACGCGGCTTCACCTATCTCTACGTGCTGCTGATGATCGCGCTCGTCAGCCTCGGCCT
GGCTGCGGCGGGCACGGTCTGGCGCACCGAGGCACGGCGGGCGAACGAAGCCGAATTGCTGTTCGTCGGCGCGCAGTACC
GCCAGGCCATCGAGAGCTACTACACGCTCGACCCGGGCCTGCCGCGGCTGCCGCAAAGCGTCGCCGACCTGCTCGAGGAC
CGGCGCCGGCCCGAGCCGGTACGCCATCTGCGGCGGGCCTACCGCGATCCGATCACCGGCAGGGAAATGCAGTCCATCGT
GGCGGAGGGCGAAGGCATCGTCGGCATGATGAGCGCAGCGCCCGGCCGTCCACTCAAGCAGGCGGGCTTCCCGCCCGAAG
AGCAGGACTTCAGCGATGCCGAAAGCTACGCCGAGTGGCGCTTCGTCTTCGTCCCGCCGACCGCGCCGCGTGCCGACGGC
GCATTCCCCGACGCGGCGGGCGCGCCCGGCCCGGCGCTGGACGGCTCAGGGCGCATGGACGCCCCCATCGAGCCCGGATA
CCCGCGATGA

Upstream 100 bases:

>100_bases
GCCGACACCTGGCAACCGCTGCCCCCCCCGGACCCCGAATCGGGCGGCGTGTACGACGTCAGGAGCGGCGCCCCCGGCAC
GGCGCGCGACGGGAGCAGCT

Downstream 100 bases:

>100_bases
AACGCAGCCCCTTCCTGCAGCCGCTTTCCCGCGAACACCATGCCGCGCTCGTGCTGGCGCGCGCCTGCGAGCGGGCAGGC
CGTTCGGGAAACGCCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESYYTLDPGLPRLPQSVADLLED
RRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAAPGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADG
AFPDAAGAPGPALDGSGRMDAPIEPGYPR

Sequences:

>Translated_189_residues
MPTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESYYTLDPGLPRLPQSVADLLED
RRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAAPGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADG
AFPDAAGAPGPALDGSGRMDAPIEPGYPR
>Mature_188_residues
PTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESYYTLDPGLPRLPQSVADLLEDR
RRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAAPGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADGA
FPDAAGAPGPALDGSGRMDAPIEPGYPR

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20690; Mature: 20558

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECHHHHHHHHHH
YTLDPGLPRLPQSVADLLEDRRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAA
HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCC
PGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADGAFPDAAGAPGPALDGSGRMD
CCCCHHHCCCCCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APIEPGYPR
CCCCCCCCC
>Mature Secondary Structure 
PTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECHHHHHHHHHH
YTLDPGLPRLPQSVADLLEDRRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAA
HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCC
PGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADGAFPDAAGAPGPALDGSGRMD
CCCCHHHCCCCCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APIEPGYPR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA