| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317442
Identifier: 74317442
GI number: 74317442
Start: 1514572
End: 1515048
Strand: Direct
Name: 74317442
Synonym: Tbd_1424
Alternate gene names: NA
Gene position: 1514572-1515048 (Clockwise)
Preceding gene: 74317440
Following gene: 74317443
Centisome position: 52.05
GC content: 65.62
Gene sequence:
>477_bases ATGAAGTCGGCGCGCCCAGCGCAGGCTCGGCTGCCATTCTCGGATTCGGTGGCGTCGCGTGCAAACCGCAGGGGAGCCGG TGCCCACGCGCACGGCGATTTTTTGCTTGAACGTATTCCACGCTTCCAGTATGCTGGAAACATGGAATCCAAAGACGCCG TCATCGCCCTGTCCGCGCTCGCCCAAGCCACGCGGCTGAACATCTTCCGTACGCTCGTCGAAGCCGGTCCGGCCGGGCTC AACGCGGGGCGGCTCGCCGAAATCGCCGCCATACCGCCGTCTTCGCTTTCGTTTCATTTGAAGGAGCTGAGCCATGCCGG GCTCGCCGAGTCCCGCCAGGAGGGCCGCTTCGTCGTATACAGCGCGCGCTTCGAGACGATGAATCGCCTGCTCGCCTATC TCACCGAAAACTGCTGCGGCGGGACACCCTGCGGCGCGAGCGACACGCCCGCCTGCACGGGCGGCGGGTCGTCGTAA
Upstream 100 bases:
>100_bases TCATGGGTCGGATCTCCCGGGTTGGTTTCAATGATGAGGCGGCATCTGCGTACCGCCCGCGCATTCTTCCCGGCTTGTGT GTCGCCCCTGTGATGGTTTG
Downstream 100 bases:
>100_bases CGAATTCACGTCACACCGCGCGGCCAAGCTCCGGCTGTTTCATCACGTTTCGACAAGGACTACTCATGACCAAACCCCTG ACCGTGCTGGTGCTGTGCAC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; ArsR Family Regulatory Protein; Arsenical Resistance Transcriptional Regulator; Regulatory Protein Arsr; Arsenic Resistance Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator ArsR Domain; Arsenic Operon Regulator; ArsR-Family Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator Containing HTH Domain ArsR; ArsR Operon Regulator ArsI; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Transcription Regulator Protein; Arsenate Reductase; Transcriptional Regulator Protein; Regulatory Protein ArsR Family; Transcriptional Regulator ArsR; Xin-Antitoxin System Antitoxin Component ArsR Family; Arsenic Operon Regulator-Like Protein; Arsenical Resistance Transcriptional Regulator Arsr
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKSARPAQARLPFSDSVASRANRRGAGAHAHGDFLLERIPRFQYAGNMESKDAVIALSALAQATRLNIFRTLVEAGPAGL NAGRLAEIAAIPPSSLSFHLKELSHAGLAESRQEGRFVVYSARFETMNRLLAYLTENCCGGTPCGASDTPACTGGGSS
Sequences:
>Translated_158_residues MKSARPAQARLPFSDSVASRANRRGAGAHAHGDFLLERIPRFQYAGNMESKDAVIALSALAQATRLNIFRTLVEAGPAGL NAGRLAEIAAIPPSSLSFHLKELSHAGLAESRQEGRFVVYSARFETMNRLLAYLTENCCGGTPCGASDTPACTGGGSS >Mature_158_residues MKSARPAQARLPFSDSVASRANRRGAGAHAHGDFLLERIPRFQYAGNMESKDAVIALSALAQATRLNIFRTLVEAGPAGL NAGRLAEIAAIPPSSLSFHLKELSHAGLAESRQEGRFVVYSARFETMNRLLAYLTENCCGGTPCGASDTPACTGGGSS
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16650; Mature: 16650
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSARPAQARLPFSDSVASRANRRGAGAHAHGDFLLERIPRFQYAGNMESKDAVIALSAL CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHH AQATRLNIFRTLVEAGPAGLNAGRLAEIAAIPPSSLSFHLKELSHAGLAESRQEGRFVVY HHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHCCCHHHHCCCCEEEE SARFETMNRLLAYLTENCCGGTPCGASDTPACTGGGSS EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSARPAQARLPFSDSVASRANRRGAGAHAHGDFLLERIPRFQYAGNMESKDAVIALSAL CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHH AQATRLNIFRTLVEAGPAGLNAGRLAEIAAIPPSSLSFHLKELSHAGLAESRQEGRFVVY HHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHCCCHHHHCCCCEEEE SARFETMNRLLAYLTENCCGGTPCGASDTPACTGGGSS EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA