| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317415
Identifier: 74317415
GI number: 74317415
Start: 1477372
End: 1477971
Strand: Direct
Name: 74317415
Synonym: Tbd_1397
Alternate gene names: NA
Gene position: 1477372-1477971 (Clockwise)
Preceding gene: 74317414
Following gene: 74317419
Centisome position: 50.77
GC content: 70.17
Gene sequence:
>600_bases ATGCGCGGGGCGACGAAACTGGCGCTGGCCGCGACCGTGGCGGCGCTTTCGGCGGCGGCCGTCGTCGTGTTCCCGACGGG CGGCGCGAAACCGGTCCCGCCGGAGGTGGACAACGACTTCTGCGTGGTCGCGCCGGCGACACCCTACGAAGCCGCGTCGG GCCTGCCGATGCTCGCGCCCAAGACCGTTCCCGATGATGCGCGCTGCCCGGTCTGCGGCATGTACCCAGCCCGTTTCCCC CACTGGGCGGCGCAAGTCGTTTTCCGCGACGGCGCCTCGCAGTTCTTCGATTCGCCGGTCGACCTGCTGGTCTTCCTCGC GCGTATCGAACGCTACAACCCGAGCTACGCGGCCGCCGACGTCGCGGGCCGCTTCGTCACGGATGCCAAGACCGGGAAGT GGACCGCGCTCGAGCAGGCCTACTTCGTCCACGGCTCGAACGCGCTCGGGCCGATGCGCGACGGTGACCTGCCTGCCTTC GCCAGCCGCAGCGAGGCTGAACGCTTCGCCGCGAAAAACGGCGGGCGCGTGCGCAAACACTCCGAGATCACCGCGGCCGA GCTGGGTGTGCTGAGCCGCAACCGACGGCATCACCACTAG
Upstream 100 bases:
>100_bases ACCCTCTTACCCGACCCGACGCCACGCCGGCCGACAATCTGCAACGTCTGATCGGCGCCTTGCTCGACGATCCGACGCTC GGGGCCGCGGATATCGGCTG
Downstream 100 bases:
>100_bases GCCGGCGAGCGCCCCACGAATTCTCGGACCAAAAAAAAACGGAGGAGACCAGGTCTCCTCCGTTTTTTTCGAAGCCGCGG TTTTCGAAGCGGCTTACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Involved In Nitrous Oxide Reduction; NosL Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRGATKLALAATVAALSAAAVVVFPTGGAKPVPPEVDNDFCVVAPATPYEAASGLPMLAPKTVPDDARCPVCGMYPARFP HWAAQVVFRDGASQFFDSPVDLLVFLARIERYNPSYAAADVAGRFVTDAKTGKWTALEQAYFVHGSNALGPMRDGDLPAF ASRSEAERFAAKNGGRVRKHSEITAAELGVLSRNRRHHH
Sequences:
>Translated_199_residues MRGATKLALAATVAALSAAAVVVFPTGGAKPVPPEVDNDFCVVAPATPYEAASGLPMLAPKTVPDDARCPVCGMYPARFP HWAAQVVFRDGASQFFDSPVDLLVFLARIERYNPSYAAADVAGRFVTDAKTGKWTALEQAYFVHGSNALGPMRDGDLPAF ASRSEAERFAAKNGGRVRKHSEITAAELGVLSRNRRHHH >Mature_199_residues MRGATKLALAATVAALSAAAVVVFPTGGAKPVPPEVDNDFCVVAPATPYEAASGLPMLAPKTVPDDARCPVCGMYPARFP HWAAQVVFRDGASQFFDSPVDLLVFLARIERYNPSYAAADVAGRFVTDAKTGKWTALEQAYFVHGSNALGPMRDGDLPAF ASRSEAERFAAKNGGRVRKHSEITAAELGVLSRNRRHHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21249; Mature: 21249
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGATKLALAATVAALSAAAVVVFPTGGAKPVPPEVDNDFCVVAPATPYEAASGLPMLAP CCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCC KTVPDDARCPVCGMYPARFPHWAAQVVFRDGASQFFDSPVDLLVFLARIERYNPSYAAAD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHH VAGRFVTDAKTGKWTALEQAYFVHGSNALGPMRDGDLPAFASRSEAERFAAKNGGRVRKH HHHHHEECCCCCCEEEHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECC SEITAAELGVLSRNRRHHH CCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRGATKLALAATVAALSAAAVVVFPTGGAKPVPPEVDNDFCVVAPATPYEAASGLPMLAP CCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCC KTVPDDARCPVCGMYPARFPHWAAQVVFRDGASQFFDSPVDLLVFLARIERYNPSYAAAD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHH VAGRFVTDAKTGKWTALEQAYFVHGSNALGPMRDGDLPAFASRSEAERFAAKNGGRVRKH HHHHHEECCCCCCEEEHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECC SEITAAELGVLSRNRRHHH CCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA