| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317412
Identifier: 74317412
GI number: 74317412
Start: 1476210
End: 1476731
Strand: Direct
Name: 74317412
Synonym: Tbd_1394
Alternate gene names: NA
Gene position: 1476210-1476731 (Clockwise)
Preceding gene: 74317411
Following gene: 74317413
Centisome position: 50.73
GC content: 65.71
Gene sequence:
>522_bases ATGAACCTGTCGCGCCCCGCAGGCGTCCTGATCCTCGTGGCCGCCGGCGCCCTCGCCGCCTGCGGCCAGGACAAGATAGC CGAGAAAGTCGCTCCGCTCGAGATTACGCAGGGCACGTCCTGCAGCCTCGACGGCATGCTGCTCGCCGATTACCCCGGCC CCAAGGCGCAGATCTTCTACGCCGGACAGACCGAGCCCGAGTTTTTCTGCGACACGGTCGAGATGTTCCACGTCTACCTC AAACCCGAGCAGGTGCGTCCGGTGCGCGGCATTTTCGTCCAGGACATGGGGAAAGCCGACTGGGACGAGCCGCGCGACAA CTGGATCGACGCGACGGCCGCCTACTACGTCCACGGCAGCAAACGACGCGGCTCGATGGGACCGACCCTGGCGAGCTTCG CCTCCGAAGGCGACGCGACCAAGTTTGCGGCCCAATACGGCGGCAAGGTCTATCGTTTCGCCGACGTCACGCCCGATATG GTCGTGCTCGACGGCGGCGCCCTCCACGACAGCACCATGTAA
Upstream 100 bases:
>100_bases CGGTCTTCCCCCCGGCGCTCGCCAACCCCTGGCTTCTGGGCCTCGTGATGCTGGGCTGGATCGTCGCGCCGCTCGGCGTC GCAACCTGGAGATTCCGTCG
Downstream 100 bases:
>100_bases GAAGCCATGGCCCATTTTTTCGAAAACCTCGACCCAGAAACCGCGGCTGAACTCGACCAGTTGTCGCGCCTGCTCTACGA ATTGCGCGAACACCTGAGCA
Product: putative nitrous oxide reduction lipoprotein
Products: NA
Alternate protein names: NosL Protein; Protein Disulfide Isomerase NosL; Lipoprotein Involved In Nitrous Oxide Reduction; Nitrous Oxide Reductase Accessory Protein NosL; Nitrous Oxide Reductase Accessory Protein; Lipoprotein; NosL Lipoprotein; Protein Disulfide Isomerase NosL Family Protein; Nosl Family Protein; NosL Copper Chaperone; NosL Protein Required For Nitrous Oxide Reduction
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNLSRPAGVLILVAAGALAACGQDKIAEKVAPLEITQGTSCSLDGMLLADYPGPKAQIFYAGQTEPEFFCDTVEMFHVYL KPEQVRPVRGIFVQDMGKADWDEPRDNWIDATAAYYVHGSKRRGSMGPTLASFASEGDATKFAAQYGGKVYRFADVTPDM VVLDGGALHDSTM
Sequences:
>Translated_173_residues MNLSRPAGVLILVAAGALAACGQDKIAEKVAPLEITQGTSCSLDGMLLADYPGPKAQIFYAGQTEPEFFCDTVEMFHVYL KPEQVRPVRGIFVQDMGKADWDEPRDNWIDATAAYYVHGSKRRGSMGPTLASFASEGDATKFAAQYGGKVYRFADVTPDM VVLDGGALHDSTM >Mature_173_residues MNLSRPAGVLILVAAGALAACGQDKIAEKVAPLEITQGTSCSLDGMLLADYPGPKAQIFYAGQTEPEFFCDTVEMFHVYL KPEQVRPVRGIFVQDMGKADWDEPRDNWIDATAAYYVHGSKRRGSMGPTLASFASEGDATKFAAQYGGKVYRFADVTPDM VVLDGGALHDSTM
Specific function: Unknown
COG id: COG4314
COG function: function code C; Predicted lipoprotein involved in nitrous oxide reduction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18674; Mature: 18674
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSRPAGVLILVAAGALAACGQDKIAEKVAPLEITQGTSCSLDGMLLADYPGPKAQIFY CCCCCCCCEEEEEECCHHHHCCCHHHHHHCCCEEECCCCCCCCCCEEEECCCCCCEEEEE AGQTEPEFFCDTVEMFHVYLKPEQVRPVRGIFVQDMGKADWDEPRDNWIDATAAYYVHGS CCCCCCHHHHHHHHEEEEEECCCCCCHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEECC KRRGSMGPTLASFASEGDATKFAAQYGGKVYRFADVTPDMVVLDGGALHDSTM CCCCCCCCHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure MNLSRPAGVLILVAAGALAACGQDKIAEKVAPLEITQGTSCSLDGMLLADYPGPKAQIFY CCCCCCCCEEEEEECCHHHHCCCHHHHHHCCCEEECCCCCCCCCCEEEECCCCCCEEEEE AGQTEPEFFCDTVEMFHVYLKPEQVRPVRGIFVQDMGKADWDEPRDNWIDATAAYYVHGS CCCCCCHHHHHHHHEEEEEECCCCCCHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEECC KRRGSMGPTLASFASEGDATKFAAQYGGKVYRFADVTPDMVVLDGGALHDSTM CCCCCCCCHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA