Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317411

Identifier: 74317411

GI number: 74317411

Start: 1475398

End: 1476213

Strand: Direct

Name: 74317411

Synonym: Tbd_1393

Alternate gene names: NA

Gene position: 1475398-1476213 (Clockwise)

Preceding gene: 74317410

Following gene: 74317412

Centisome position: 50.7

GC content: 65.44

Gene sequence:

>816_bases
GTGGAATTCAGCCAAATCGGGGTCATCGCCGGCAAGGAATTCTGGGACCGCATCCGCAACCGGTGGGTCCTCGCCGTCGC
CCTCGTGTTCACCGTTTTCGCACTCGCGATCGCCTATTTCGGCGGTGCGCAGCAGGGCACCGTCGGCTTCCGCTCGATCG
AGTTCACAATCGCGAGCCTGGTCAGTCTGGTCATCTACCTGATCCCGCTGATCGCGCTGGTTCTCGGCTTCGACGCGATC
GTCGGCGAGCGTGAGCGCGGTTCGCTCGACCTGTTGTTGTCGATGCCGATCACCCGGCTGGAGTTGCTGCTCGGCAAGTA
CCTCGGGCTTGCCGCCGCGCTCGCGTTCTCGACTGTCGCCGGCTTCGGCCTGGTCGCGATCGTGCTCGCCACCCAGCTCG
ATCTCGCCGCCCTGCTCCACTACTTCGGCTTCATGCTGAGTTCGGTCCTGCTCGGGATGGCCTTCCTGAGTCTCGCGGTC
ATGGTCTCCGCCTTCGCCGCCGACCGCACGCGCGCTTCGGGCATGGCGATCGCCCTGTGGTTCTTCTTCGTGCTCGTGTT
CGACCTGCTGCTGCTTGGCGCGCTCGTCGTCAGCGGCGGCCAGTGGGGCGGCGACATCCTGCCCTACCTGCTGCTCGCCA
ATCCGGCCGACGTCTTCCGTATCCTCAACATTTTTTCGCTATCCGACGTCCGCAGCCTTTACGGGCTCGCGACGGTCTTC
CCCCCGGCGCTCGCCAACCCCTGGCTTCTGGGCCTCGTGATGCTGGGCTGGATCGTCGCGCCGCTCGGCGTCGCAACCTG
GAGATTCCGTCGATGA

Upstream 100 bases:

>100_bases
AAGCGCTGGCGGCACTCGACGGCCGCGTGCTCGACCTGCACGTGCGCGAACCCTCGCTCGAAGACGTATTCTTCGGTTTT
TCCGACTAAAGGGCAGACGC

Downstream 100 bases:

>100_bases
ACCTGTCGCGCCCCGCAGGCGTCCTGATCCTCGTGGCCGCCGGCGCCCTCGCCGCCTGCGGCCAGGACAAGATAGCCGAG
AAAGTCGCTCCGCTCGAGAT

Product: ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASLVSLVIYLIPLIALVLGFDAI
VGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVAGFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAV
MVSAFAADRTRASGMAIALWFFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF
PPALANPWLLGLVMLGWIVAPLGVATWRFRR

Sequences:

>Translated_271_residues
MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASLVSLVIYLIPLIALVLGFDAI
VGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVAGFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAV
MVSAFAADRTRASGMAIALWFFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF
PPALANPWLLGLVMLGWIVAPLGVATWRFRR
>Mature_271_residues
MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASLVSLVIYLIPLIALVLGFDAI
VGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVAGFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAV
MVSAFAADRTRASGMAIALWFFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF
PPALANPWLLGLVMLGWIVAPLGVATWRFRR

Specific function: Involved in copper processing [H]

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29325; Mature: 29325

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VSLVIYLIPLIALVLGFDAIVGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAVMVSAFAADRTRASGMAIALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PPALANPWLLGLVMLGWIVAPLGVATWRFRR
CHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VSLVIYLIPLIALVLGFDAIVGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAVMVSAFAADRTRASGMAIALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PPALANPWLLGLVMLGWIVAPLGVATWRFRR
CHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]