| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317411
Identifier: 74317411
GI number: 74317411
Start: 1475398
End: 1476213
Strand: Direct
Name: 74317411
Synonym: Tbd_1393
Alternate gene names: NA
Gene position: 1475398-1476213 (Clockwise)
Preceding gene: 74317410
Following gene: 74317412
Centisome position: 50.7
GC content: 65.44
Gene sequence:
>816_bases GTGGAATTCAGCCAAATCGGGGTCATCGCCGGCAAGGAATTCTGGGACCGCATCCGCAACCGGTGGGTCCTCGCCGTCGC CCTCGTGTTCACCGTTTTCGCACTCGCGATCGCCTATTTCGGCGGTGCGCAGCAGGGCACCGTCGGCTTCCGCTCGATCG AGTTCACAATCGCGAGCCTGGTCAGTCTGGTCATCTACCTGATCCCGCTGATCGCGCTGGTTCTCGGCTTCGACGCGATC GTCGGCGAGCGTGAGCGCGGTTCGCTCGACCTGTTGTTGTCGATGCCGATCACCCGGCTGGAGTTGCTGCTCGGCAAGTA CCTCGGGCTTGCCGCCGCGCTCGCGTTCTCGACTGTCGCCGGCTTCGGCCTGGTCGCGATCGTGCTCGCCACCCAGCTCG ATCTCGCCGCCCTGCTCCACTACTTCGGCTTCATGCTGAGTTCGGTCCTGCTCGGGATGGCCTTCCTGAGTCTCGCGGTC ATGGTCTCCGCCTTCGCCGCCGACCGCACGCGCGCTTCGGGCATGGCGATCGCCCTGTGGTTCTTCTTCGTGCTCGTGTT CGACCTGCTGCTGCTTGGCGCGCTCGTCGTCAGCGGCGGCCAGTGGGGCGGCGACATCCTGCCCTACCTGCTGCTCGCCA ATCCGGCCGACGTCTTCCGTATCCTCAACATTTTTTCGCTATCCGACGTCCGCAGCCTTTACGGGCTCGCGACGGTCTTC CCCCCGGCGCTCGCCAACCCCTGGCTTCTGGGCCTCGTGATGCTGGGCTGGATCGTCGCGCCGCTCGGCGTCGCAACCTG GAGATTCCGTCGATGA
Upstream 100 bases:
>100_bases AAGCGCTGGCGGCACTCGACGGCCGCGTGCTCGACCTGCACGTGCGCGAACCCTCGCTCGAAGACGTATTCTTCGGTTTT TCCGACTAAAGGGCAGACGC
Downstream 100 bases:
>100_bases ACCTGTCGCGCCCCGCAGGCGTCCTGATCCTCGTGGCCGCCGGCGCCCTCGCCGCCTGCGGCCAGGACAAGATAGCCGAG AAAGTCGCTCCGCTCGAGAT
Product: ABC transporter transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASLVSLVIYLIPLIALVLGFDAI VGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVAGFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAV MVSAFAADRTRASGMAIALWFFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF PPALANPWLLGLVMLGWIVAPLGVATWRFRR
Sequences:
>Translated_271_residues MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASLVSLVIYLIPLIALVLGFDAI VGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVAGFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAV MVSAFAADRTRASGMAIALWFFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF PPALANPWLLGLVMLGWIVAPLGVATWRFRR >Mature_271_residues MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASLVSLVIYLIPLIALVLGFDAI VGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVAGFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAV MVSAFAADRTRASGMAIALWFFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF PPALANPWLLGLVMLGWIVAPLGVATWRFRR
Specific function: Involved in copper processing [H]
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29325; Mature: 29325
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VSLVIYLIPLIALVLGFDAIVGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH GFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAVMVSAFAADRTRASGMAIALW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC PPALANPWLLGLVMLGWIVAPLGVATWRFRR CHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEFSQIGVIAGKEFWDRIRNRWVLAVALVFTVFALAIAYFGGAQQGTVGFRSIEFTIASL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VSLVIYLIPLIALVLGFDAIVGERERGSLDLLLSMPITRLELLLGKYLGLAAALAFSTVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH GFGLVAIVLATQLDLAALLHYFGFMLSSVLLGMAFLSLAVMVSAFAADRTRASGMAIALW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FFFVLVFDLLLLGALVVSGGQWGGDILPYLLLANPADVFRILNIFSLSDVRSLYGLATVF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC PPALANPWLLGLVMLGWIVAPLGVATWRFRR CHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2170125 [H]